RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ELOVL3Q9HB03 270 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 A0A1B0GTH9 108 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 PIN1P1O15428 100 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 ARL6IP5O75915 188 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 GDF1P27539 372 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 THBS2P35442 1172 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 RAC3P60763 192 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 EIF2B1Q14232 305 aaKnown RBP13.31□□□□□ -0.28
CCT4-201ENST00000394440 KCTD18Q6PI47 426 aaPredicted RBP13.31□□□□□ -0.28
CCT4-201ENST00000394440 LINC00696Q6ZRV3 163 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 CREB3L2Q70SY1 520 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 PRSS35Q8N3Z0 413 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 MDS2Q8NDY4 140 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 C4orf45Q96LM5 186 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 SFXN2Q96NB2 322 aa13.31□□□□□ -0.28
CCT4-201ENST00000394440 NAA11Q9BSU3 229 aaPredicted RBP13.31□□□□□ -0.28
CCT4-201ENST00000394440 TRBV5-5A0A0J9YX44 114 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 MED19A0JLT2 244 aaPredicted RBP13.3□□□□□ -0.28
CCT4-201ENST00000394440 ZNF879B4DU55 563 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 LOC110117498-PIK3R3F6TDL0 507 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 SMAD9O15198 467 aaKnown RBP13.3□□□□□ -0.28
CCT4-201ENST00000394440 ZNF823P16415 610 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 KIR3DL2P43630 455 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 ZNF79Q15937 498 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 ZNF181Q2M3W8 571 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 DCDC5Q6ZRR9 648 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 ESPNLQ6ZVH7 1005 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 OR5AK2Q8NH90 309 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 DCBLD2Q96PD2 775 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 MROQ9BYG7 248 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 PLA2G3Q9NZ20 509 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 UGT2A1Q9Y4X1 527 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 IGHV3-15A0A0B4J1V0 119 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 TBX1O43435 398 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 LAP3P28838 519 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 CCR9P51686 369 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 CLDN17P56750 224 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 OR10A3P58181 314 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 PPP3R1P63098 170 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 SFXN4Q6P4A7 337 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 LYSMD2Q8IV50 215 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 SULF2Q8IWU5 870 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 C11orf40Q8WZ69 217 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 MCHR2Q969V1 340 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 DERL3Q96Q80 235 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 ZCCHC4Q9H5U6 513 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 LRP12Q9Y561 859 aa13.3□□□□□ -0.28
CCT4-201ENST00000394440 NCOA6Q14686 2063 aaPredicted RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 ARGFXA6NJG6 315 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 TMEM212A6NML5 194 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 SRSF10O75494 262 aaKnown RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 HPNP05981 417 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 ENPP1P22413 925 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 ZNF133P52736 654 aaPredicted RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 CLDN15P56746 228 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 MFAP5Q13361 173 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 WDR38Q5JTN6 314 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 CEP78Q5JTW2 689 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 DCXRQ7Z4W1 244 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 VASH2Q86V25 355 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 CENPSQ8N2Z9 138 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 OR9K2Q8NGE7 335 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 ACOT12Q8WYK0 555 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 KCTD12Q96CX2 325 aaKnown RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 ZNF385AQ96PM9 386 aaKnown RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 A0A1W2PPK0 400 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 TRABD2BA6NFA1 517 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 TRAPPC6AO75865 159 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 PNPP00491 289 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 RAB3BP20337 219 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 NOVA1P51513 510 aaKnown RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 SUCLG1P53597 346 aaKnown RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 RASGEF1BQ0VAM2 473 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 SRSF6Q13247 344 aaKnown RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 OXA1LQ15070 435 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 Q499Y3 187 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 LRFN4Q6PJG9 635 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 KRT77Q7Z794 578 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 LINC00346Q8IVM7 164 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 ZIC4Q8N9L1 334 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 CCDC32Q9BV29 185 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 SF3B5Q9BWJ5 86 aaKnown RBP13.29□□□□□ -0.28
CCT4-201ENST00000394440 SRRQ9GZT4 340 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 NOX4Q9NPH5 578 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 COMMD3Q9UBI1 195 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 CYB5R1Q9UHQ9 305 aa13.29□□□□□ -0.28
CCT4-201ENST00000394440 OR5H15A6NDH6 313 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 ACOD1A6NK06 481 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 ZNF726A6NNF4 738 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 LINC01387J3KSC0 135 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 EIF1AYO14602 144 aaKnown RBP13.28□□□□□ -0.28
CCT4-201ENST00000394440 NME2P1O60361 137 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 ZNF254O75437 659 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 ZNF432O94892 652 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 NME2P22392 152 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 MAGEB1P43366 347 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 RIDAP52758 137 aaKnown RBP13.28□□□□□ -0.28
CCT4-201ENST00000394440 HSD17B12Q53GQ0 312 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 CARD17Q5XLA6 110 aa13.28□□□□□ -0.28
CCT4-201ENST00000394440 STEAP3Q658P3 488 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms