RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 A8MV72 311 aaPredicted RBP13.35□□□□□ -0.27
MKS1-202ENST00000393119 UPK3AO75631 287 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 CBR3O75828 277 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 RGS9O75916 674 aaPredicted RBP13.35□□□□□ -0.27
MKS1-202ENST00000393119 IGHMP01871 453 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 FGF9P31371 208 aaPredicted RBP13.35□□□□□ -0.27
MKS1-202ENST00000393119 SOX6P35712 828 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 NOVA1P51513 510 aaKnown RBP13.35□□□□□ -0.27
MKS1-202ENST00000393119 ADAM8P78325 824 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 FOXO1Q12778 655 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 TMPRSS7Q7RTY8 843 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 ZBTB8AQ96BR9 441 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 OR14A2Q96R54 314 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 ABCB9Q9NP78 766 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 B3GAT2Q9NPZ5 323 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 B3GALT5Q9Y2C3 310 aa13.35□□□□□ -0.27
MKS1-202ENST00000393119 FAM166BA8MTA8 275 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 CDRT15L2A8MXV6 281 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 TM4SF5O14894 197 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 TRAF3IP2O43734 574 aaPredicted RBP13.34□□□□□ -0.27
MKS1-202ENST00000393119 ZFPL1O95159 310 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 M6PRP20645 277 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 NBL1P41271 181 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 EIF1AXP47813 144 aaKnown RBP13.34□□□□□ -0.27
MKS1-202ENST00000393119 GBX2P52951 348 aaPredicted RBP13.34□□□□□ -0.27
MKS1-202ENST00000393119 CLDN15P56746 228 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 ABHD17BQ5VST6 288 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 TMEM81Q6P7N7 255 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 C5orf46Q6UWT4 87 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 PXKQ7Z7A4 578 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 GPALPP1Q8IXQ4 340 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 SPERTQ8NA61 448 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 MIB2Q96AX9 1013 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 ZNF385AQ96PM9 386 aaKnown RBP13.34□□□□□ -0.27
MKS1-202ENST00000393119 DHRS9Q9BPW9 319 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 IRF2BPLQ9H1B7 796 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 MIXL1Q9H2W2 232 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 FRRS1LQ9P0K9 344 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 COMMD3Q9UBI1 195 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 A0A0B4J203 849 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 A0A0B4J293 547 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 ACOD1A6NK06 481 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 OGG1O15527 345 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 ABHD16AO95870 558 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 GDF1P27539 372 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 RBMS1P29558 406 aaKnown RBP13.34□□□□□ -0.27
MKS1-202ENST00000393119 EIF1P41567 113 aaKnown RBP13.34□□□□□ -0.27
MKS1-202ENST00000393119 NUBP1P53384 320 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 OR1C1Q15619 314 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.34□□□□□ -0.27
MKS1-202ENST00000393119 SULF2Q8IWU5 870 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 UEVLDQ8IX04 471 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 OR51A4Q8NGJ6 313 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 TMEM41AQ96HV5 264 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 SRRQ9GZT4 340 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 DLL3Q9NYJ7 618 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 GSTK1Q9Y2Q3 226 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 PCDHGB7Q9Y5F8 929 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 FKBP7Q9Y680 259 aa13.34□□□□□ -0.27
MKS1-202ENST00000393119 FAM186AA6NE01 2351 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 A0A1B0GVC2 190 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 A6NIN4 97 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 EIF1AYO14602 144 aaKnown RBP13.33□□□□□ -0.28
MKS1-202ENST00000393119 PNPP00491 289 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 IL7P13232 177 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 NTF4P34130 210 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 BDH1Q02338 343 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 ASAH1Q13510 395 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 BAK1Q16611 211 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 PHYHD1Q5SRE7 291 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 SLC38A6Q8IZM9 456 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 OTOSQ8NHW6 89 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 ZFAND1Q8TCF1 268 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 SMIM19Q96E16 107 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 MAP6Q96JE9 813 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 FYTTD1Q96QD9 318 aaKnown RBP13.33□□□□□ -0.28
MKS1-202ENST00000393119 NKX3-1Q99801 234 aaPredicted RBP13.33□□□□□ -0.28
MKS1-202ENST00000393119 TRAF4Q9BUZ4 470 aaPredicted RBP13.33□□□□□ -0.28
MKS1-202ENST00000393119 FBXL3Q9UKT7 428 aa13.33□□□□□ -0.28
MKS1-202ENST00000393119 TRABD2BA6NFA1 517 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 ZNHIT1O43257 154 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 LRP3O75074 770 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 IL1AP01583 271 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 ITGB2P05107 769 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 SLC2A2P11168 524 aaPredicted RBP13.32□□□□□ -0.28
MKS1-202ENST00000393119 AZGP1P25311 298 aaKnown RBP13.32□□□□□ -0.28
MKS1-202ENST00000393119 ADH6P28332 368 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 CLDN17P56750 224 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 ACTA2P62736 377 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 ACTG2P63267 376 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 SLC25A35Q3KQZ1 300 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 TCTE3Q8IZS6 198 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 SYS1Q8N2H4 156 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 PRSS35Q8N3Z0 413 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 OR6S1Q8NH40 331 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 ROBO4Q8WZ75 1007 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 KLHL15Q96M94 604 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 ELOVL3Q9HB03 270 aa13.32□□□□□ -0.28
MKS1-202ENST00000393119 RANGRFQ9HD47 186 aaPredicted RBP13.32□□□□□ -0.28
MKS1-202ENST00000393119 EMC7Q9NPA0 242 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms