RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 C1orf174Q8IYL3 243 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 GALNT4Q8N4A0 578 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 NANOS1Q8WY41 292 aaKnown RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 ALKBH3Q96Q83 286 aaPredicted RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 DCLRE1CQ96SD1 692 aaKnown RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 YTHDF1Q9BYJ9 559 aaKnown RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 FGF20Q9NP95 211 aaPredicted RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP44-202ENST00000393091 IRGMA1A4Y4 181 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 SNTNA6NMZ2 147 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 C12orf71A8MTZ7 269 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 MRPS14O60783 128 aaKnown RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 ZNF14P17017 642 aaPredicted RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 DCTDP32321 178 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 IZUMO2Q6UXV1 221 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 TCEANCQ8N8B7 351 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 COQ7Q99807 217 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 INPP5EQ9NRR6 644 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 CNOT2Q9NZN8 540 aaKnown RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 COA3Q9Y2R0 106 aaPredicted RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 PCDHGB1Q9Y5G3 927 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 CLDN1O95832 211 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 IGHA1P01876 353 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 POU1F1P28069 291 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 FOXD4Q12950 439 aaPredicted RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 SLC18B1Q6NT16 456 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 SHFQ7M4L6 423 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 C8orf59Q8N0T1 100 aaPredicted RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 FAM81AQ8TBF8 368 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 ZNF775Q96BV0 537 aaPredicted RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 SIGLEC11Q96RL6 698 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 PNRC2Q9NPJ4 139 aaKnown RBP11.59□□□□□ -0.55
USP44-202ENST00000393091 KCNN3Q9UGI6 736 aa11.59□□□□□ -0.55
USP44-202ENST00000393091 FREM1Q5H8C1 2179 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 OR6C6A6NF89 314 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 SMNDC1O75940 238 aaKnown RBP eCLIP11.58□□□□□ -0.56
USP44-202ENST00000393091 TUBG1P23258 451 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 GSTT1P30711 240 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 OTX1P32242 354 aaPredicted RBP11.58□□□□□ -0.56
USP44-202ENST00000393091 ENTPD1P49961 510 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 CD47Q08722 323 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 ZIK1Q3SY52 487 aaPredicted RBP11.58□□□□□ -0.56
USP44-202ENST00000393091 SLC35F1Q5T1Q4 408 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 CARD17Q5XLA6 110 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 PLBD1Q6P4A8 553 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 DEGS2Q6QHC5 323 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 THAP5Q7Z6K1 395 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 SKA3Q8IX90 412 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 SYT14Q8NB59 555 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 PLEKHA8Q96JA3 519 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 ADGRL4Q9HBW9 690 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 TUBG2Q9NRH3 451 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 LHFPL6Q9Y693 200 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 NKX2-6A6NCS4 301 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 PHYHO14832 338 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 ROM1Q03395 351 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 SLC36A2Q495M3 483 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 ZNF684Q5T5D7 378 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 IL17RDQ8NFM7 739 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 C11orf40Q8WZ69 217 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 S100PBPQ96BU1 408 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 ACTR6Q9GZN1 396 aa11.58□□□□□ -0.56
USP44-202ENST00000393091 TLX2O43763 284 aaPredicted RBP11.57□□□□□ -0.56
USP44-202ENST00000393091 FMO3P31513 532 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 FAM27E3Q08E93 113 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 RAB40BQ12829 278 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 CDK5R2Q13319 367 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 ETFDHQ16134 617 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 LRRC36Q1X8D7 754 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 ADAM5Q6NVV9 412 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 KRT74Q7RTS7 529 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 ST7LQ8TDW4 575 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 CLN6Q9NWW5 311 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 TIMM10BQ9Y5J6 103 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 COMMD3-BMI1R4GMX3 469 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 ACOD1A6NK06 481 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 EEF1E1-BLOC1S5C9J1V9 151 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 H3BSA7 217 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 H7C1C5 153 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 EEF1E1O43324 174 aaKnown RBP11.57□□□□□ -0.56
USP44-202ENST00000393091 KRT33AO76009 404 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 AGFG2O95081 481 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 FARS2O95363 451 aaKnown RBP11.57□□□□□ -0.56
USP44-202ENST00000393091 PTHP01270 115 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 LCN6P62502 163 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 TMEM53Q6P2H8 277 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 ZNF813Q6ZN06 617 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 UBE2J2Q8N2K1 259 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 FBXO17Q96EF6 278 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 MYCBPQ99417 103 aaPredicted RBP11.57□□□□□ -0.56
USP44-202ENST00000393091 ZNF649Q9BS31 505 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 CCDC159P0C7I6 412 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 PCSK6P29122 969 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 NUDT6P53370 316 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 ECH1Q13011 328 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 APOFQ13790 326 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 LUZP2Q86TE4 346 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 BBS1Q8NFJ9 593 aa11.57□□□□□ -0.56
USP44-202ENST00000393091 CYGBQ8WWM9 190 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms