RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 YIPF5Q969M3 257 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 TMEM106AQ96A25 262 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 STRADBQ9C0K7 418 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 ZNF275Q9NSD4 429 aaPredicted RBP20.68■□□□□ 0.9
VPS16-201ENST00000380443 COPZ2Q9P299 210 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 HRH3Q9Y5N1 445 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 ANXA2P2A6NMY6 339 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 ANXA2P07355 339 aaKnown RBP20.67■□□□□ 0.9
VPS16-201ENST00000380443 SOX2P48431 317 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 GLB1L2Q8IW92 636 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 UBE2J2Q8N2K1 259 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 GTPBP8Q8N3Z3 284 aaPredicted RBP20.67■□□□□ 0.9
VPS16-201ENST00000380443 TOMM5Q8N4H5 51 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 RHBDD1Q8TEB9 315 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 PAQR8Q8TEZ7 354 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 MRPL13Q9BYD1 178 aaKnown RBP20.67■□□□□ 0.9
VPS16-201ENST00000380443 SMOC1Q9H4F8 434 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 LIN7BQ9HAP6 207 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 PLEKHA1Q9HB21 404 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 ING1Q9UK53 422 aaPredicted RBP20.67■□□□□ 0.9
VPS16-201ENST00000380443 FBXL2Q9UKC9 423 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 R4GMQ9 66 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 WDR87Q6ZQQ6 2873 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 SLC35A1P78382 337 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 DYRK1AQ13627 763 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 RPS19BP1Q86WX3 136 aaKnown RBP20.67■□□□□ 0.9
VPS16-201ENST00000380443 SMIM4Q8WVI0 70 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 TSEN15Q8WW01 171 aaKnown RBP20.67■□□□□ 0.9
VPS16-201ENST00000380443 SLC7A6Q92536 515 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 MIB2Q96AX9 1013 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 OXGR1Q96P68 337 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 B3GAT1Q9P2W7 334 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 FOXJ3Q9UPW0 622 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 LRP12Q9Y561 859 aa20.67■□□□□ 0.9
VPS16-201ENST00000380443 A0A0B4J203 849 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 LANCL1O43813 399 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 CD2P06729 351 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 DCTDP32321 178 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 ART1P52961 327 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 BIDP55957 195 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 MLF1P58340 268 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 SLC36A2Q495M3 483 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 PLA1AQ53H76 456 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 SLC22A10Q63ZE4 541 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 ZNF227Q86WZ6 799 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 SH2D2AQ9NP31 389 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 PADI1Q9ULC6 663 aa20.66■□□□□ 0.9
VPS16-201ENST00000380443 A0A1B0GTH9 108 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 SHISA8B8ZZ34 492 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 IGHG1P01857 330 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 ISG15P05161 165 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 NR2C1P13056 603 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 ADRA2CP18825 462 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 P2RY4P51582 365 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 TATDN3Q17R31 274 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 ZNF704Q6ZNC4 412 aaPredicted RBP20.65■□□□□ 0.9
VPS16-201ENST00000380443 ASB18Q6ZVZ8 466 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 FCRLAQ7L513 359 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 OR10H5Q8NGA6 315 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 OR6X1Q8NH79 312 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 HAVCR1Q96D42 359 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 ST6GAL2Q96JF0 529 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 DPAGT1Q9H3H5 408 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 OR5V1Q9UGF6 321 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 STEAP1Q9UHE8 339 aa20.65■□□□□ 0.9
VPS16-201ENST00000380443 INMT-MINDY4F8WBC2 141 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 SRSF10O75494 262 aaKnown RBP20.64■□□□□ 0.9
VPS16-201ENST00000380443 ECDO95905 644 aaPredicted RBP20.64■□□□□ 0.9
VPS16-201ENST00000380443 MAGEB1P43366 347 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 DSCR4P56555 118 aaPredicted RBP20.64■□□□□ 0.9
VPS16-201ENST00000380443 TBRG1Q3YBR2 411 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 ATAD3CQ5T2N8 411 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 TCEAL6Q6IPX3 200 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 CDH24Q86UP0 819 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 ST7LQ8TDW4 575 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 TCEAL3Q969E4 200 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 ORAI1Q96D31 301 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 SLC25A44Q96H78 314 aaPredicted RBP20.64■□□□□ 0.9
VPS16-201ENST00000380443 SGCZQ96LD1 299 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 ZFP3Q96NJ6 502 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 OR5B2Q96R09 309 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 SMAD5Q99717 465 aaKnown RBP20.64■□□□□ 0.9
VPS16-201ENST00000380443 CDCP1Q9H5V8 836 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 MED29Q9NX70 200 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 CLEC4AQ9UMR7 237 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 DHDHQ9UQ10 334 aa20.64■□□□□ 0.9
VPS16-201ENST00000380443 MRPS7Q9Y2R9 242 aaKnown RBP20.64■□□□□ 0.9
VPS16-201ENST00000380443 A0A1B0GVC2 190 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 A6NIN4 97 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 PMS2P2O95744 297 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 ACHEP22303 614 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 LAP3P28838 519 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
VPS16-201ENST00000380443 AP3S2P59780 193 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 KCNJ8Q15842 424 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.64■□□□□ 0.89
VPS16-201ENST00000380443 SLC25A38Q96DW6 304 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 FOXN4Q96NZ1 517 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 CKLFQ9UBR5 152 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 LOXL2Q9Y4K0 774 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms