RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 ENTPD5O75356 428 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 GMNNO75496 209 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 FAM107AO95990 144 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 CLPTM1O96005 669 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 CSF3P09919 207 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 CTLA4P16410 223 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 THBS2P35442 1172 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 WNT5AP41221 380 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 PDLIM4P50479 330 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 RAP1BP61224 184 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 RAP1AP62834 184 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 PSG4Q00888 419 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 LOXL1Q08397 574 aaPredicted RBP13.38□□□□□ -0.27
SDHB-201ENST00000375499 KRR1Q13601 381 aaKnown RBP13.38□□□□□ -0.27
SDHB-201ENST00000375499 CARTPTQ16568 116 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 UGT2A3Q6UWM9 527 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 PTCHD4Q6ZW05 846 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 RRM2BQ7LG56 351 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 DPPA2Q7Z7J5 298 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 ZNF570Q96NI8 536 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 RBP7Q96R05 134 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 BPESC1Q9GZL8 116 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 WNT5BQ9H1J7 359 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 CDH20Q9HBT6 801 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 DYNLRB1Q9NP97 96 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 EMC7Q9NPA0 242 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 FAM53CQ9NYF3 392 aa13.38□□□□□ -0.27
SDHB-201ENST00000375499 LOC100509620A0A075B734 347 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 IGHV4-61A0A0C4DH41 118 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 TCRBV5S2A0A599 114 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 PRSS37A4D1T9 235 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 B2RBV5 119 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 LYNX1G3V0Z9 82 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 NCR1O76036 304 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 NDUFB2O95178 105 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 SNAP29O95721 258 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 FABP3P05413 133 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 FAM157CP0CG43 387 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 LYNX1P0DP58 116 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 NR2C1P13056 603 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 RRM2P31350 389 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 HSF2Q03933 536 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 TBC1D28Q2M2D7 210 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 ALKBH6Q3KRA9 238 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 FAM27BQ5VT28 67 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 ZNF101Q8IZC7 436 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 CCDC197Q8NCU1 140 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 GTF3AQ92664 365 aaKnown RBP13.37□□□□□ -0.27
SDHB-201ENST00000375499 NSL1Q96IY1 281 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 POM121L2Q96KW2 1035 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 ZNF416Q9BWM5 594 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 OR2H1Q9GZK4 316 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 RAB1BQ9H0U4 201 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 CCNB1IP1Q9NPC3 277 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 IL1RAPQ9NPH3 570 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 NRIP3Q9NQ35 241 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 YAE1D1Q9NRH1 226 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 GRHPRQ9UBQ7 328 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 SPEF1Q9Y4P9 236 aa13.37□□□□□ -0.27
SDHB-201ENST00000375499 IQCMA0A1B0GVH7 501 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 UNC119BA6NIH7 251 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 A8MV72 311 aaPredicted RBP13.36□□□□□ -0.27
SDHB-201ENST00000375499 M0R233 179 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 SOCS2O14508 198 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 SYNGR3O43761 229 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 GADD45GO95257 159 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 CST2P09228 141 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 DAOP14920 347 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 SDHAP31040 664 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 NR4A2P43354 598 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 EVX1P49640 407 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 RPS23P62266 143 aaKnown RBP13.36□□□□□ -0.27
SDHB-201ENST00000375499 MS4A2Q01362 244 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 GGTLC2Q14390 218 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 RGS7BPQ6MZT1 257 aaPredicted RBP13.36□□□□□ -0.27
SDHB-201ENST00000375499 ZDHHC21Q8IVQ6 265 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 CLPTM1LQ96KA5 538 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 PIMREGQ9BSJ6 248 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 SYT4Q9H2B2 425 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 NDE1Q9NXR1 346 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 DUSP13Q9UII6 198 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 CDC42EP3Q9UKI2 254 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 AURKCQ9UQB9 309 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 IER3IP1Q9Y5U9 82 aa13.36□□□□□ -0.27
SDHB-201ENST00000375499 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■■■■□ 22.9
SDHB-201ENST00000375499 IGLV3-9A0A075B6K5 115 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 VSTM5A8MXK1 200 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 DCTN6O00399 190 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 PHF1O43189 567 aaPredicted RBP13.35□□□□□ -0.27
SDHB-201ENST00000375499 MPZL1O95297 269 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 STAMBPO95630 424 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 PPP1R3DO95685 299 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 GPANK1O95872 356 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 HPXP02790 462 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 IGHV4-31P0DP07 118 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 NAT2P11245 290 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 ZNF16P17020 682 aaPredicted RBP13.35□□□□□ -0.27
SDHB-201ENST00000375499 ITGA2P17301 1181 aa13.35□□□□□ -0.27
SDHB-201ENST00000375499 MSR1P21757 451 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms