RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 LSM6P62312 80 aaKnown RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 TRA2BP62995 288 aaKnown RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 IL13RA1P78552 427 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 OR1Q1Q15612 314 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 ARHGAP40Q5TG30 622 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 GLB1LQ6UWU2 654 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF574Q6ZN55 896 aaPredicted RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 KCTD9Q7L273 389 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 FRMD1Q8N878 549 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 ASB17Q8WXJ9 295 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF775Q96BV0 537 aaPredicted RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 TNFRSF13CQ96RJ3 184 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 SLC6A7Q99884 636 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 AIF1LQ9BQI0 150 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 MTHFD2LQ9H903 347 aaPredicted RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 FARSAQ9Y285 508 aaKnown RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 DENND4CQ5VZ89 1909 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 C13orf42A0A1B0GVH6 325 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 EIF1AYO14602 144 aaKnown RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 PMP2P02689 132 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 SERPINA5P05154 406 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 C8orf89P0DMQ9 161 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 FOSL2P15408 326 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 EIF1AXP47813 144 aaKnown RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 DIO1P49895 249 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF658BQ4V348 819 aaPredicted RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 ACTBL2Q562R1 376 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 OR4C11Q6IEV9 310 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 TMEM150AQ86TG1 271 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 PNLDC1Q8NA58 520 aaKnown RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 OR5AK2Q8NH90 309 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 ZNRF4Q8WWF5 429 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 CNRIP1Q96F85 164 aaPredicted RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 SLC35A4Q96G79 324 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 TCTN2Q96GX1 697 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 Q96M85 177 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 PRO1933Q9H354 126 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 KCNK15Q9H427 330 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 DOK5Q9P104 306 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 SERTAD3Q9UJW9 196 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 MED31Q9Y3C7 131 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
PRPF4-201ENST00000374198 TRBV5-5A0A0J9YX44 114 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 A0A1W2PPE2 198 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF736B4DX44 427 aaPredicted RBP11.69□□□□□ -0.54
PRPF4-201ENST00000374198 CDC40O60508 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
PRPF4-201ENST00000374198 RPP14O95059 124 aaKnown RBP11.69□□□□□ -0.54
PRPF4-201ENST00000374198 HIST1H1CP16403 213 aaKnown RBP11.69□□□□□ -0.54
PRPF4-201ENST00000374198 IGFBP4P22692 258 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 SLC6A6P31641 620 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 MC3RP41968 323 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 CD81P60033 236 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 TDGQ13569 410 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 ELOCQ15369 112 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 TCEAL6Q6IPX3 200 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 EIF5AL1Q6IS14 154 aaKnown RBP11.69□□□□□ -0.54
PRPF4-201ENST00000374198 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 C17orf64Q86WR6 236 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 NPAS4Q8IUM7 802 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 OVCA2Q8WZ82 227 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 GLYATL1Q969I3 302 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 MRPL37Q9BZE1 423 aaKnown RBP11.69□□□□□ -0.54
PRPF4-201ENST00000374198 PARP11Q9NR21 331 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 GDF2Q9UK05 429 aaPredicted RBP11.69□□□□□ -0.54
PRPF4-201ENST00000374198 CLEC4EQ9ULY5 219 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 PLAGL1Q9UM63 463 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 MRPS33Q9Y291 106 aaKnown RBP11.69□□□□□ -0.54
PRPF4-201ENST00000374198 A0A1W2PS29 197 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 LINC01553A4QN01 128 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 MSGN1A6NI15 193 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 PRR32B1ATL7 298 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 H0YIZ8 118 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 CYB5AP00167 134 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 F10P00742 488 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 LRG1P02750 347 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 PAX1P15863 534 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 SLC26A5P58743 744 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 LMAN2Q12907 356 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 BIKQ13323 160 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 ANKRD39Q53RE8 183 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 HEPN1Q6WQI6 88 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 CASTOR1Q8WTX7 329 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 MAFIPQ8WZ33 124 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 OR8D1Q8WZ84 308 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 CCDC74AQ96AQ1 378 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 ASB16Q96NS5 453 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 CDC6Q99741 560 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF559Q9BR84 538 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 NMES1Q9C002 83 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 ZDHHC8Q9ULC8 765 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 WASF3Q9UPY6 502 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 VWA8A3KMH1 1905 aa11.69□□□□□ -0.54
PRPF4-201ENST00000374198 LOC100509620A0A075B734 347 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 CENPVL1A0A0U1RR11 272 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 DCTN6O00399 190 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 PLGP00747 810 aaPredicted RBP11.68□□□□□ -0.54
PRPF4-201ENST00000374198 OR8U9P0C7N5 309 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF28P17035 718 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 SERPINF1P36955 418 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms