RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 TMEM100Q9NV29 134 aa11.66□□□□□ -0.54
GPC4-201ENST00000370828 KNL1Q8NG31 2342 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 SUSD5O60279 629 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 TNFP01375 233 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 IGFBP6P24592 240 aaPredicted RBP11.65□□□□□ -0.54
GPC4-201ENST00000370828 FCGR2CP31995 323 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 PGFP49763 221 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 BDH1Q02338 343 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ELAVL3Q14576 367 aaKnown RBP11.65□□□□□ -0.54
GPC4-201ENST00000370828 NCMAPQ5T1S8 102 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 C12orf73Q69YU5 71 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 BAGE3Q86Y29 109 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 BAGE2Q86Y30 109 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 TMEFF1Q8IYR6 380 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 GALNT16Q8N428 558 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 WDR76Q9H967 626 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 SLC25A19Q9HC21 320 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 GCM1Q9NP62 436 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 BET1LQ9NYM9 111 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 EMC9Q9Y3B6 208 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ARRDC5A6NEK1 342 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 A8MXE2 369 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 PPP5D1E7EU14 171 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 NAGAP17050 411 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 AVPR2P30518 371 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 F2RL1P55085 397 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 SIRT6Q8N6T7 355 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 NECAP1Q8NC96 275 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 OR2G2Q8NGZ5 317 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 TBC1D20Q96BZ9 403 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ADAM19Q9H013 955 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 PLEKHA3Q9HB20 300 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 PARD6AQ9NPB6 346 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 TMEM30AQ9NV96 361 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 CBLCQ9ULV8 474 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ADAMTSL3P82987 1691 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 PPM1DO15297 605 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 IL5P05113 134 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 CPMP14384 443 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ZNF273Q14593 569 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 CDK5R1Q15078 307 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 MPPED2Q15777 294 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ZNF776Q68DI1 518 aaPredicted RBP11.65□□□□□ -0.54
GPC4-201ENST00000370828 C11orf87Q6NUJ2 197 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ABI3BPQ7Z7G0 1075 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ASB17Q8WXJ9 295 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 SMIM19Q96E16 107 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 CMC2Q9NRP2 79 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 STARD5Q9NSY2 213 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 ALKBH4Q9NXW9 302 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 KLHL13Q9P2N7 655 aa11.65□□□□□ -0.54
GPC4-201ENST00000370828 CACNA1SQ13698 1873 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 TMEM202A6NGA9 273 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 P2RY10O00398 339 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 SIGLEC5O15389 551 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 JTBO76095 146 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 H2AFB1P0C5Y9 115 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 BLVRBP30043 206 aaPredicted RBP11.65□□□□□ -0.55
GPC4-201ENST00000370828 SIGLEC14Q08ET2 396 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 CEBPEQ15744 281 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 SEZ6L2Q6UXD5 910 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 TMEM123Q8N131 208 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 PRR18Q8N4B5 295 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 HINT2Q9BX68 163 aa11.65□□□□□ -0.55
GPC4-201ENST00000370828 TMEM218A2RU14 115 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 MBLAC1A4D2B0 266 aaPredicted RBP11.64□□□□□ -0.55
GPC4-201ENST00000370828 HPXP02790 462 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 MT-ND4LP03901 98 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 LIMS3P0CW19 117 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 LIMS4P0CW20 117 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 TIMP2P16035 220 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 RPUSD3Q6P087 351 aaKnown RBP11.64□□□□□ -0.55
GPC4-201ENST00000370828 OPN5Q6U736 354 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 CPXM2Q8N436 756 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 LFNGQ8NES3 379 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 FAM3CQ92520 227 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 TRMT61AQ96FX7 289 aaKnown RBP11.64□□□□□ -0.55
GPC4-201ENST00000370828 ELOVL1Q9BW60 279 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 ZNF160Q9HCG1 818 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 NXPH3O95157 252 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 SPP1P10451 314 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 BLKP51451 505 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 FJX1Q86VR8 437 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 MUC20Q8N307 709 aaPredicted RBP11.64□□□□□ -0.55
GPC4-201ENST00000370828 OR1F2PQ96R84 312 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 VAMP8Q9BV40 100 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 PTGES2Q9H7Z7 377 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 MED9Q9NWA0 146 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 NTMQ9P121 344 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 A0A1W2PQU0 124 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 PRAMEF27A3QJZ7 478 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 VSTM2BA6NLU5 285 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 LRP3O75074 770 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 ZNF84P51523 738 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 RELQ04864 619 aaPredicted RBP11.64□□□□□ -0.55
GPC4-201ENST00000370828 PRDX1Q06830 199 aaKnown RBP11.64□□□□□ -0.55
GPC4-201ENST00000370828 ARHGAP19Q14CB8 494 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 PRAMEF9Q5VWM5 478 aa11.64□□□□□ -0.55
GPC4-201ENST00000370828 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
GPC4-201ENST00000370828 ZNF610Q8N9Z0 462 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms