RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NPY6RQ99463 290 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 SULT4A1Q9BR01 284 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZNF717Q9BY31 904 aaPredicted RBP2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 PLA2G12AQ9BZM1 189 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 KCNJ16Q9NPI9 418 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 TSSC4Q9Y5U2 329 aaPredicted RBP2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 TICRRQ7Z2Z1 1910 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 A0A1W2PPV9 198 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 MAGEB3O15480 346 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 YIF1AO95070 293 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 GUCA1CO95843 209 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 HLA-DQA1P01909 254 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 FGGP02679 453 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 DBTP11182 482 aaKnown RBP2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 EPS15P42566 896 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 CXCL12P48061 93 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 CLINT1Q14677 625 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 IRF4Q15306 451 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 CCDC92Q53HC0 331 aaPredicted RBP2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 CFAP157Q5JU67 520 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 CCNJQ5T5M9 372 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 METTL21CQ5VZV1 264 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 LRRC74BQ6ZQY2 392 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 TMEM135Q86UB9 458 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 PSTKQ8IV42 348 aaKnown RBP2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 PIK3IP1Q96FE7 263 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 DDX19AQ9NUU7 478 aaKnown RBP2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 SH3BGRL2Q9UJC5 107 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 MRPS7Q9Y2R9 242 aaKnown RBP2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 CARHSP1Q9Y2V2 147 aaKnown RBP2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZNF407Q9C0G0 2248 aa2.01□□□□□ -2.09
RNU4-28P-201ENST00000364739 NID2Q14112 1375 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 BTBD17A6NE02 478 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 SNTNA6NMZ2 147 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 HAS3O00219 553 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 IGHDP01880 384 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 COL8A2P25067 703 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 ACTG2P63267 376 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 ECH1Q13011 328 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 IFT88Q13099 833 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 IGFBP7Q16270 282 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 OR4F6Q8NGB9 312 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 OR10R2Q8NGX6 335 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 OR10J6PQ8NGY7 276 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 RTN4IP1Q8WWV3 396 aaPredicted RBP2□□□□□ -2.09
RNU4-28P-201ENST00000364739 TEKT3Q9BXF9 490 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 CWH43Q9H720 699 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZNF586Q9NXT0 402 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 CLEC4AQ9UMR7 237 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 ST3GAL6Q9Y274 331 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 DENND4AQ7Z401 1863 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 ITGB4P16144 1822 aa2□□□□□ -2.09
RNU4-28P-201ENST00000364739 C5orf63A6NC05 138 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 VGLL3A8MV65 326 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 FOXE1O00358 373 aaPredicted RBP1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 ATP1B2P14415 290 aaPredicted RBP1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 ETS2P15036 469 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 PRRX1P54821 245 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 RCAN2Q14206 197 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 GK3PQ14409 553 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 ATAD3BQ5T9A4 648 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 PMF1Q6P1K2 205 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 SLC25A48Q6ZT89 311 aaKnown RBP1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZSCAN30Q86W11 494 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZFP41Q8N8Y5 198 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 PIFOQ8TCI5 191 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZNF488Q96MN9 340 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 SLC38A10Q9HBR0 1119 aa1.99□□□□□ -2.09
RNU4-28P-201ENST00000364739 CNTNAP1P78357 1384 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 UBXN8O00124 270 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 BPY2O14599 106 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 PSTPIP1O43586 416 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 GMFGO60234 142 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 DPM1O60762 260 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 TSPAN12O95859 305 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 DTYMKP23919 212 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 SSTR5P35346 364 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 GPX6P59796 221 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 UNQ9165/PRO28630Q6UXU0 137 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 WDFY1Q8IWB7 410 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 STEAP2Q8NFT2 490 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 LILRB4Q8NHJ6 448 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 IFT74Q96LB3 600 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 TIMM17AQ99595 171 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 PARP12Q9H0J9 701 aaKnown RBP1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 OR52D1Q9H346 318 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 FAM49BQ9NUQ9 324 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 SLC7A8Q9UHI5 535 aa1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 AHDC1Q5TGY3 1603 aaPredicted RBP1.98□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZNF816-ZNF321PA0A0X1KG74 233 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZNF716A6NP11 495 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 MRPS12O15235 138 aaKnown RBP1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 MTX2O75431 263 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 HLA-DQB1P01920 261 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 CEACAM3P40198 252 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 SEC61GP60059 68 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 MXD1Q05195 221 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 TWF1Q12792 350 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 CDH17Q12864 832 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms