RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 RELAQ04206 551 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 FOXF1Q12946 379 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 OR5M9Q8NGP3 310 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 KCTD12Q96CX2 325 aaKnown RBP16.93■□□□□ 0.3
CLIP2-202ENST00000361545 RNF212BA8MTL3 300 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 PRICKLE3O43900 615 aaPredicted RBP16.93■□□□□ 0.3
CLIP2-202ENST00000361545 FAM157BP0CG42 384 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 RPA2P15927 270 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 SPI1P17947 270 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 TGM4P49221 684 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 HES1Q14469 280 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 PAN3Q58A45 887 aaKnown RBP16.93■□□□□ 0.3
CLIP2-202ENST00000361545 TMEM99Q8N816 258 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 OR52N1Q8NH53 320 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 MRGPRX4Q96LA9 322 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.93■□□□□ 0.3
CLIP2-202ENST00000361545 HS3ST1O14792 307 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 CTSVO60911 334 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 CRYAAP02489 173 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 SRMP19623 302 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 ARRB2P32121 409 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 SNCAP37840 140 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 NXPH1P58417 271 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 SNRPGP62308 76 aaKnown RBP16.93■□□□□ 0.3
CLIP2-202ENST00000361545 ADPRMQ3LIE5 342 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 MSI2Q96DH6 328 aaKnown RBP16.93■□□□□ 0.3
CLIP2-202ENST00000361545 BANF2Q9H503 90 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 P4HTMQ9NXG6 502 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 MTCH2Q9Y6C9 303 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 SLC22A20A6NK97 555 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 CALCBP10092 127 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 HTR2BP41595 481 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 EMP3P54852 163 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 BOD1Q96IK1 185 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 BARHL1Q9BZE3 327 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 PPIL1Q9Y3C6 166 aa16.93■□□□□ 0.3
CLIP2-202ENST00000361545 ZNF732B4DXR9 585 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 CBR3O75828 277 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 OR1C1Q15619 314 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 TRIP6Q15654 476 aaKnown RBP16.92■□□□□ 0.3
CLIP2-202ENST00000361545 BCL2A1Q16548 175 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 TCTN1Q2MV58 587 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 NAXDQ8IW45 347 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 ZNF683Q8IZ20 524 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 DEFB108BQ8NET1 73 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 RPS23P62266 143 aaKnown RBP16.92■□□□□ 0.3
CLIP2-202ENST00000361545 OR52W1Q6IF63 320 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 GABRG3Q99928 467 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 COLQQ9Y215 455 aaPredicted RBP16.92■□□□□ 0.3
CLIP2-202ENST00000361545 KLK4Q9Y5K2 254 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 TMEM82A0PJX8 343 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 PAPLNO95428 1278 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 GFRALQ6UXV0 394 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 DVL3Q92997 716 aaPredicted RBP16.92■□□□□ 0.3
CLIP2-202ENST00000361545 OXGR1Q96P68 337 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 BCL2L10Q9HD36 194 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 LILRB5O75023 590 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 BEX5Q5H9J7 111 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 DTWD2Q8NBA8 298 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 TMEM185AQ8NFB2 350 aa16.92■□□□□ 0.3
CLIP2-202ENST00000361545 OR2A25A4D2G3 310 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 DEGS1O15121 323 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 THEM4Q5T1C6 240 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 TMEM81Q6P7N7 255 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 PRDM7Q9NQW5 492 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 LOC107986453A0A1B0GWG9 222 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 MEIOCA2RUB1 952 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 GPR137BO60478 399 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 HOXD12P35452 270 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 PMPCAQ10713 525 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 CAMK2BQ13554 666 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 ZNF169Q14929 603 aaPredicted RBP16.91■□□□□ 0.3
CLIP2-202ENST00000361545 SOWAHCQ53LP3 525 aaPredicted RBP16.91■□□□□ 0.3
CLIP2-202ENST00000361545 ACTBL2Q562R1 376 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 USP51Q70EK9 711 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 DOK3Q7L591 496 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 LINC01555Q8NAE3 123 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 OR6M1Q8NGM8 313 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 GPBAR1Q8TDU6 330 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 RTL8AQ9BWD3 113 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 VN1R1Q9GZP7 353 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 CMC2Q9NRP2 79 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 SHISA8B8ZZ34 492 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 NKAIN3Q8N8D7 197 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 KIAA1958Q8N8K9 716 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 MAGEB4O15481 346 aaPredicted RBP16.91■□□□□ 0.3
CLIP2-202ENST00000361545 DLX5P56178 289 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 EIF3IQ13347 325 aaKnown RBP16.91■□□□□ 0.3
CLIP2-202ENST00000361545 PRSS41Q7RTY9 318 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 TIMD4Q96H15 378 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 ABHD6Q9BV23 337 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 TFAP2AP05549 437 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 BCKDHBP21953 392 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 LIPAP38571 399 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 RAD52P43351 418 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 KCNE3Q9Y6H6 103 aa16.91■□□□□ 0.3
CLIP2-202ENST00000361545 TRA2AQ13595 282 aaKnown RBP eCLIP16.9■□□□□ 0.3
CLIP2-202ENST00000361545 KIRREL2Q6UWL6 708 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms