RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 SOD3P08294 240 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 OR8U9P0C7N5 309 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 SCGB2B2Q4G0G5 96 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 TMCO2Q7Z6W1 182 aaPredicted RBP12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 TMEM150AQ86TG1 271 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 GKN2Q86XP6 184 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF280BQ86YH2 543 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 COMMD1Q8N668 190 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 OR8U1Q8NH10 309 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 NOL4LQ96MY1 436 aaPredicted RBP12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 SLC6A7Q99884 636 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 RAB33BQ9H082 229 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 ELP3Q9H9T3 547 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 OR2S2Q9NQN1 319 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 CUTCQ9NTM9 273 aa12.06□□□□□ -0.48
SPTSSB-201ENST00000359175 C5orf51A6NDU8 294 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 MSGN1A6NI15 193 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF736B4DX44 427 aaPredicted RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 CRYABP02511 175 aaKnown RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 IRF1P10914 325 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 LIPCP11150 499 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 TAF1CQ15572 869 aaPredicted RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF684Q5T5D7 378 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 RANBP3LQ86VV4 465 aaPredicted RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 LSRQ86X29 649 aaPredicted RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF610Q8N9Z0 462 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 RSC1A1Q92681 617 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 INSM2Q96T92 566 aaPredicted RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 GPR61Q9BZJ8 451 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 SLC5A7Q9GZV3 580 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 B4GALT6Q9UBX8 382 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 TRAV8-7A0A075B6U6 113 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 OR5H15A6NDH6 313 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 OR5H1A6NKK0 313 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF587BE7ETH6 402 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 PSMD9O00233 223 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 ADAP1O75689 374 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 OR2C1O95371 312 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 DUS4LO95620 317 aaKnown RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 CYB5AP00167 134 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 OR8G3PP0DMU2 310 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 DPEP1P16444 411 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 TACR3P29371 465 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 PTGER1P34995 402 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 DIO1P49895 249 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 PDX1P52945 283 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 RPS23P62266 143 aaKnown RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 PRAMEF14Q5SWL7 426 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 ARHGAP40Q5TG30 622 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF836Q6ZNA1 936 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 C5orf24Q7Z6I8 188 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 OR10AD1Q8NGE0 317 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 OR51A7Q8NH64 312 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF417Q8TAU3 575 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 CCDC74AQ96AQ1 378 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 RBM18Q96H35 190 aaKnown RBP12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 SCRT1Q9BWW7 348 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 TAF9BQ9HBM6 251 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 MARCH5Q9NX47 278 aa12.05□□□□□ -0.48
SPTSSB-201ENST00000359175 A0A087WV48 116 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 TAAR5O14804 337 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 SERPINF1P36955 418 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 SOX2P48431 317 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 UCP2P55851 309 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 GRB14Q14449 540 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 THEM4Q5T1C6 240 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 PRSS54Q6PEW0 395 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 Q6ZRG5 221 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 KCTD9Q7L273 389 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 CD163Q86VB7 1156 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 OR52E2Q8NGJ4 325 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 OR51L1Q8NGJ5 315 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 OR5AK2Q8NH90 309 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 MR1Q95460 341 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 PRRT1Q99946 306 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 WSB2Q9NYS7 404 aaPredicted RBP12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 MSRAQ9UJ68 235 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 PRG3Q9Y2Y8 225 aaPredicted RBP12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 NUP210LQ5VU65 1888 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 CCDC187A0A096LP49 1063 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 TRBV5-7A0A0A0MS05 114 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF840PA6NDX5 716 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 CTSHP09668 335 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 S1PR1P21453 382 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 SLC6A6P31641 620 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 SNCAP37840 140 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF84P51523 738 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 C2orf76Q3KRA6 126 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 OR7G2Q8NG99 324 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 SUSD6Q92537 303 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 SLC22A18Q96BI1 424 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 RIMS4Q9H426 269 aaPredicted RBP12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 FARSAQ9Y285 508 aaKnown RBP12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 VWA8A3KMH1 1905 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 A0A087WUJ7 227 aa12.04□□□□□ -0.48
SPTSSB-201ENST00000359175 C13orf42A0A1B0GVH6 325 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms