RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CHATP28329 748 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 DCTDP32321 178 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 CD79BP40259 229 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 SLC35A1P78382 337 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 STK11Q15831 433 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 SSX1Q16384 188 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 VWA2Q5GFL6 755 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 TMEM201Q5SNT2 666 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 FAM122CQ6P4D5 195 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 AMER3Q8N944 861 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 SPACA5Q96QH8 159 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 ATF6BQ99941 703 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 SEMA4CQ9C0C4 833 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 CDCP1Q9H5V8 836 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 SLC22A13Q9Y226 551 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 ICE1Q9Y2F5 2266 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 PCMT1P22061 227 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 OR1D5P58170 312 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 AGBL5Q8NDL9 886 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 OR4Q3Q8NH05 313 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 ST7LQ8TDW4 575 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 USP54Q70EL1 1684 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 MSTNO14793 375 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 TGFBR3Q03167 851 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 MFGE8Q08431 387 aaPredicted RBP12.53□□□□□ -0.4
VCP-201ENST00000358901 PRTGQ2VWP7 1150 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 OR9K2Q8NGE7 335 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 SGK3Q96BR1 496 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 ZNF416Q9BWM5 594 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 PCDHGA5Q9Y5G8 931 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 WIF1Q9Y5W5 379 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 COL4A1P02462 1669 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 NHSQ6T4R5 1651 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 SGCEO43556 437 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 ACTL6BO94805 426 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 CD160O95971 181 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 CLINT1Q14677 625 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 ZNF793Q6ZN11 406 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 MARC2Q969Z3 335 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 KIF25Q9UIL4 384 aa12.53□□□□□ -0.4
VCP-201ENST00000358901 A0A087WV62 115 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 E9PI62 339 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 LIMS3P0CW19 117 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 LIMS4P0CW20 117 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 FOXK1P85037 733 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 EXOSC2Q13868 293 aaKnown RBP12.52□□□□□ -0.4
VCP-201ENST00000358901 INSL4Q14641 139 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 TMEM240Q5SV17 173 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 OGFOD3Q6PK18 319 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 GABRG1Q8N1C3 465 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 RNF32Q9H0A6 362 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 PRDM7Q9NQW5 492 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 DNAJB11Q9UBS4 358 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 FBXO7Q9Y3I1 522 aa12.52□□□□□ -0.4
VCP-201ENST00000358901 OR6C65A6NJZ3 312 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 CD3DP04234 171 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 ZNF728P0DKX0 622 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 IL2RGP31785 369 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 CRYBB2P43320 205 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 TIAL1Q01085 375 aaKnown RBP eCLIP12.52□□□□□ -0.41
VCP-201ENST00000358901 HNF4GQ14541 408 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 ZNF684Q5T5D7 378 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 STAC2Q6ZMT1 411 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 FAM122BQ7Z309 247 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 GCM1Q9NP62 436 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 GPATCH2Q9NW75 528 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 ZNF223Q9UK11 482 aaPredicted RBP12.52□□□□□ -0.41
VCP-201ENST00000358901 ACHEP22303 614 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 PPICP45877 212 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 P2RX1P51575 399 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 HMGA2P52926 109 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 CA13Q8N1Q1 262 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 PPP1R35Q8TAP8 253 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 HAS2Q92819 552 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 TSLPQ969D9 159 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 PPIL1Q9Y3C6 166 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 STRCQ7RTU9 1775 aa12.52□□□□□ -0.41
VCP-201ENST00000358901 A0A1B0GX78 115 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 TMEM200CA6NKL6 621 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 MCRIP1C9JLW8 97 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 PRAMEF4O60810 478 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 FGF9P31371 208 aaPredicted RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 IKZF1Q13422 519 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 PHLDA2Q53GA4 152 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 SOHLH1Q5JUK2 328 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 WWTR1Q9GZV5 400 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 PRMT8Q9NR22 394 aaPredicted RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 CYSLTR2Q9NS75 346 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 ASH2LQ9UBL3 628 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 PISDQ9UG56 409 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 KCNG2Q9UJ96 466 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 CNR1P21554 472 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 EMDP50402 254 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 ERVK-16P61578 105 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 C2orf76Q3KRA6 126 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 AGBL4Q5VU57 503 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms