RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 RAB3CQ96E17 227 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 CNTNAP3BQ96NU0 1288 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 SERINC2Q96SA4 455 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 HDAC8Q9BY41 377 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 FBXL3Q9UKT7 428 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 FARSAQ9Y285 508 aaKnown RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 NUP210Q8TEM1 1887 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 TRAV8-7A0A075B6U6 113 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 PRICKLE3O43900 615 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 KAT7O95251 611 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CD3DP04234 171 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 ADRA2CP18825 462 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 AGAP20933 346 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 RAB5CP51148 216 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 EFNB2P52799 333 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 PPIAP62937 165 aaKnown RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CLINT1Q14677 625 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 PDGFRLQ15198 375 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CEBPEQ15744 281 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 USF2Q15853 346 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SCGB2B2Q4G0G5 96 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 C10orf91Q5T1B1 145 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 DGAT2L6Q6ZPD8 337 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 C15orf54Q8N8G6 183 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC2A12Q8TD20 617 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 HAVCR1Q96D42 359 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CCDC3Q9BQI4 270 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 RSRP1Q9BUV0 290 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC17A9Q9BYT1 436 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM185BQ9H7F4 350 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 DUSP22Q9NRW4 184 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 HAO2Q9NYQ3 351 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CHRNA9Q9UGM1 479 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 MOKQ9UQ07 419 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 EYSQ5T1H1 3165 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 KANTRA0A1W2PQU2 76 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF705EA8MWA4 302 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SNRPGP15A8MWD9 76 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 AP4M1O00189 453 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 HRKO00198 91 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC25A12O75746 678 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CSTAP01040 98 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 IGHV2-5P01817 119 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF10P21506 573 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CCKBRP32239 447 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 TSFMP43897 325 aaKnown RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 LUMP51884 338 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SQSTM1Q13501 440 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 RBM39Q14498 530 aaKnown RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNHIT3Q15649 155 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR52W1Q6IF63 320 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 TSSK4Q6SA08 328 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 ABHD13Q7L211 337 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF627Q7L945 461 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 DPY19L4Q7Z388 723 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CARFQ8N187 725 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 NPEPL1Q8NDH3 523 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2AK2Q8NG84 335 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC39A7Q92504 469 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 NKD1Q969G9 470 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 MISP3Q96FF7 219 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SEC22AQ96IW7 307 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 C2orf88Q9BSF0 95 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 SEC11CQ9BY50 192 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 EGLN1Q9GZT9 426 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF230Q9UIE0 474 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 LAMP5Q9UJQ1 280 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 TBX21Q9UL17 535 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 KLHDC2Q9Y2U9 406 aa7.48□□□□□ -1.21
CDC42SE1-201ENST00000357235 CXorf65A6NEN9 183 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ELOA3DA6NLF2 546 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 H0YGG7 62 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 RDH16O75452 317 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 GPR75O95800 540 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 RAB40ALP0C0E4 278 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 TYRP1P17643 537 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 PAX6P26367 422 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 DDTP30046 118 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ARF3P61204 181 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 PPA1Q15181 289 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ELOA3BQ3SY89 546 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 Q499Y3 187 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 PYY3Q5JQD4 70 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM31Q5JXX7 168 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ELFN2Q5R3F8 820 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 LIN54Q6MZP7 749 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ULK3Q6PHR2 472 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 FIGLAQ6QHK4 219 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC35D2Q76EJ3 337 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM200AQ86VY9 491 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC35F3Q8IY50 421 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 DND1Q8IYX4 353 aaKnown RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 AVL9Q8NBF6 648 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ELOA3Q8NG57 546 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 RAB40AQ8WXH6 277 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 RBM18Q96H35 190 aaKnown RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 SPACA7Q96KW9 195 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2A5Q96R48 311 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 MICU1Q9BPX6 476 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 OCSTAMPQ9BR26 566 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms