RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ZNF823P16415 610 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 ITGA3P26006 1051 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 CLRN1P58418 232 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 MEP1BQ16820 701 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 SPINK14Q6IE38 97 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 XKRXQ6PP77 449 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 SULF2Q8IWU5 870 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 LAX1Q8IWV1 398 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 THEM6Q8WUY1 208 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 C11orf40Q8WZ69 217 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 MCHR2Q969V1 340 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 TMEM45BQ96B21 275 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 ABCB9Q9NP78 766 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 ABRACLQ9P1F3 81 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 R4GMQ9 66 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 VPS13AQ96RL7 3174 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 ZNF716A6NP11 495 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 NOTOA8MTQ0 251 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 HIST1H3AP68431 136 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 EIF2B1Q14232 305 aaKnown RBP15.3■□□□□ 0.04
VPS13B-201ENST00000355155 HIST2H3PS2Q5TEC6 136 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 SLC25A25Q6KCM7 469 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 ZNF544Q6NX49 715 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 HIST2H3AQ71DI3 136 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 C20orf196Q8IYI0 205 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 OR14L1PQ8NHC6 308 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 JSRP1Q96MG2 331 aaPredicted RBP15.3■□□□□ 0.04
VPS13B-201ENST00000355155 MRI1Q9BV20 369 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 RNF122Q9H9V4 155 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 ACKR4Q9NPB9 350 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 FAM86C1Q9NVL1 165 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 ANKRD10Q9NXR5 420 aa15.3■□□□□ 0.04
VPS13B-201ENST00000355155 A0A1B0GVG6 124 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 PDCD5O14737 125 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 TMCC2O75069 709 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 RIDAP52758 137 aaKnown RBP15.29■□□□□ 0.04
VPS13B-201ENST00000355155 CLDN15P56746 228 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 CDC20Q12834 499 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 ZNF79Q15937 498 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 SFXN4Q6P4A7 337 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 GDPD1Q8N9F7 314 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 ZFP62Q8NB50 900 aaPredicted RBP15.29■□□□□ 0.04
VPS13B-201ENST00000355155 NSMAFQ92636 917 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 PDCD1LG2Q9BQ51 273 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 TTTY10Q9BZA0 68 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 DLL3Q9NYJ7 618 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 GLTPQ9NZD2 209 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 ADAM30Q9UKF2 790 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 IGKV3D-15A0A087WSY6 115 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 CYTIPO60759 359 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 SPARCP09486 303 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 KLK2P20151 261 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 RAB3BP20337 219 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 CTSSP25774 331 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 EVX1P49640 407 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 OC90Q02509 493 aaPredicted RBP15.29■□□□□ 0.04
VPS13B-201ENST00000355155 LRFN4Q6PJG9 635 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 OR13C5Q8NGS8 318 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 SETD6Q8TBK2 473 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 CEP19Q96LK0 163 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 SP140LQ9H930 580 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 LRP12Q9Y561 859 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 FLVCR1Q9Y5Y0 555 aa15.29■□□□□ 0.04
VPS13B-201ENST00000355155 ZNF726A6NNF4 738 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 TNFSF11O14788 317 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 CEACAM4O75871 244 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 HLA-DQB1P01920 261 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 ENPP1P22413 925 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 MMP16P51512 607 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 SCAND1P57086 179 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 HSD17B12Q53GQ0 312 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 WDR38Q5JTN6 314 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 PDSS1Q5T2R2 415 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 AGAP7PQ5VUJ5 663 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 YRDCQ86U90 279 aaKnown RBP15.28■□□□□ 0.04
VPS13B-201ENST00000355155 HSD17B8Q92506 261 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 CPNE4Q96A23 557 aaPredicted RBP15.28■□□□□ 0.04
VPS13B-201ENST00000355155 PNPLA2Q96AD5 504 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 SFXN2Q96NB2 322 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 AGAP4Q96P64 663 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 EMC6Q9BV81 110 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 COMMD4Q9H0A8 199 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 TPK1Q9H3S4 243 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 PPP1R3EQ9H7J1 279 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 NIPAL2Q9H841 368 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 RABL2AQ9UBK7 228 aaPredicted RBP15.28■□□□□ 0.04
VPS13B-201ENST00000355155 RABL2BQ9UNT1 228 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 HLA-DQA2P01906 255 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 LHX2P50458 406 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 TTTY12Q9BZ98 90 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 FAIMQ9NVQ4 179 aa15.28■□□□□ 0.04
VPS13B-201ENST00000355155 FRYLO94915 3013 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 MPZL1O95297 269 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 SRMP19623 302 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 GDF1P27539 372 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 FAM27D1Q5T7N8 215 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 LRRC69Q6ZNQ3 347 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 CENPSQ8N2Z9 138 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 OR14A2Q96R54 314 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 G6PC2Q9NQR9 355 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms