RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 KCNJ3P48549 501 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 SLC7A9P82251 487 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 PLGLB1Q02325 96 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF528Q3MIS6 628 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 TMEM151BQ8IW70 566 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 OR5L1Q8NGL2 311 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 HMGCLL1Q8TB92 370 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 OR51I2Q9H344 312 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 PDE4DIPQ5VU43 2346 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 A0A1W2PPQ1 181 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 TMEM218A2RU14 115 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 GPR75O95800 540 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 MMP2P08253 660 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 DUSP1P28562 367 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 TOMM34Q15785 309 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 C2orf76Q3KRA6 126 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 CCSMST1Q4G0I0 132 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 TMEM184AQ6ZMB5 413 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 STAC2Q6ZMT1 411 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 Q96M85 177 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 CPEB1Q9BZB8 566 aaKnown RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 PDE7BQ9NP56 450 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 STARD5Q9NSY2 213 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 TRAV1-2A0A0B4J238 106 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 CRYBA1P05813 215 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 CHRM2P08172 466 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 CD14P08571 375 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 HOXA9P31269 272 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 MTCP1P56278 107 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 CTBSQ01459 385 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 ACVR1Q04771 509 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 PRDX1Q06830 199 aaKnown RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 WDR5BQ86VZ2 330 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 LINC00346Q8IVM7 164 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 MMP21Q8N119 569 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 C2orf50Q96LR7 162 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 OR5B2Q96R09 309 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 PLEKHA2Q9HB19 425 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 HBQ1P09105 142 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 MVDP53602 400 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 FAM69BQ5VUD6 431 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 PLCXD3Q63HM9 321 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 C12orf73Q69YU5 71 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 SYS1Q8N2H4 156 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 MARCH1Q8TCQ1 289 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 GNPNAT1Q96EK6 184 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 DTD2Q96FN9 168 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 C11orf84Q9BUA3 381 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 DEFB126Q9BYW3 111 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 NKX2-4Q9H2Z4 354 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 FTSJ1Q9UET6 329 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 PRR35P0CG20 571 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 NTF3P20783 257 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 AVPR2P30518 371 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 ATP1B3P54709 279 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 GUCA2AQ02747 115 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 MRPL49Q13405 166 aaKnown RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 MIDNQ504T8 468 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 TIPARPQ7Z3E1 657 aaKnown RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 MUC20Q8N307 709 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 DAZAP1Q96EP5 407 aaKnown RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 C1orf198Q9H425 327 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 UBQLN4Q9NRR5 601 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 ELF5Q9UKW6 265 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 A0A1W2PPH5 198 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 HMSDA8MTL9 139 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 CASRP41180 1078 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 DVL1P1P54792 670 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 RAB30Q15771 203 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 SLC16A11Q8NCK7 471 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 OR11H7Q8NGC8 314 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 OR9A4Q8NGU2 314 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 OR6K3Q8NGY3 331 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 ZFPM2Q8WW38 1151 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 RPUSD4Q96CM3 377 aaKnown RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 ZDHHC5Q9C0B5 715 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 BANF2Q9H503 90 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 GPR34Q9UPC5 381 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 PCDHGA9Q9Y5G4 932 aaKnown RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 PTBP3O95758 552 aaKnown RBP11.1□□□□□ -0.63
COL12A1-202ENST00000345356 GLI4P10075 376 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 TIMP2P16035 220 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 ACKR3P25106 362 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 HRH1P35367 487 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 REEP5Q00765 189 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 SERTAD2Q14140 314 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 DOC2BQ14184 412 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 UBXN2BQ14CS0 331 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 ARHGAP11BQ3KRB8 267 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 STPG2Q8N412 459 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF596Q8TC21 504 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 NUDCD2Q8WVJ2 157 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 TSLPQ969D9 159 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 NECAP2Q9NVZ3 263 aa11.1□□□□□ -0.63
COL12A1-202ENST00000345356 A0A0A6YYC8 382 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 E5RGE8 158 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 I3L1I5 382 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms