RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 FCRL6Q6DN72 434 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 FAM46BQ96A09 425 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 ACKR4Q9NPB9 350 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 SLC27A6Q9Y2P4 619 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 LRRK1Q38SD2 2015 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 A0A1W2PPC1 479 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 ERCC1P07992 297 aaPredicted RBP13.45□□□□□ -0.26
CLCN1-201ENST00000343257 LAG3P18627 525 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 PI3P19957 117 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 SPOCK1Q08629 439 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 PJVKQ0ZLH3 352 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 GGTLC2Q14390 218 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 ADAM5Q6NVV9 412 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 CORO6Q6QEF8 472 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 VN1R4Q7Z5H5 301 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 DMBX1Q8NFW5 382 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 ZNF417Q8TAU3 575 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 PAPOLGQ9BWT3 736 aaKnown RBP13.45□□□□□ -0.26
CLCN1-201ENST00000343257 SEC11CQ9BY50 192 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 SYT4Q9H2B2 425 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 RCC2Q9P258 522 aaKnown RBP13.45□□□□□ -0.26
CLCN1-201ENST00000343257 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 MRPS2Q9Y399 296 aaKnown RBP13.45□□□□□ -0.26
CLCN1-201ENST00000343257 C5orf52A6NGY3 159 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 MAP3K8P41279 467 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 ACAA2P42765 397 aaKnown RBP13.45□□□□□ -0.26
CLCN1-201ENST00000343257 CTXN1P60606 82 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 MST1LQ2TV78 715 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 VWA2Q5GFL6 755 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 FAM76BQ5HYJ3 339 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 DNM1P46Q6ZS02 220 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 RTN4RL2Q86UN3 420 aa13.45□□□□□ -0.26
CLCN1-201ENST00000343257 LOC100289279A0A1B0GTE1 492 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 RNASEK-C17orf49H0YIS7 233 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 P2RX6O15547 441 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 FGF16O43320 207 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 CLN5O75503 358 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 HTR3BO95264 441 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 EFEMP2O95967 443 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 RNF224P0DH78 156 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 WDR38Q5JTN6 314 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 PGAP1Q75T13 922 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 CRIPAKQ8N1N5 446 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 OR51A2Q8NGJ7 313 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 HIST1H2BAQ96A08 127 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 PFDN5Q99471 154 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 MAP3K3Q99759 626 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 SLC25A21Q9BQT8 299 aaPredicted RBP13.44□□□□□ -0.26
CLCN1-201ENST00000343257 MRI1Q9BV20 369 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 OR51M1Q9H341 326 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 KCNG2Q9UJ96 466 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 A0A1B0GV50 99 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 A0A1W2PPH5 198 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 C1QTNF3-AMACRE9PGA6 284 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 M0R036 132 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 MED6O75586 246 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 ZNF735P0CB33 412 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 CD79AP11912 226 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 RCC1P18754 421 aaPredicted RBP13.44□□□□□ -0.26
CLCN1-201ENST00000343257 DGAT2L6Q6ZPD8 337 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 ANKRD33Q7Z3H0 272 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 PPP1R3BQ86XI6 285 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 ZNF584Q8IVC4 421 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 ZSCAN4Q8NAM6 433 aaPredicted RBP13.44□□□□□ -0.26
CLCN1-201ENST00000343257 NUDCD2Q8WVJ2 157 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 SECTM1Q8WVN6 248 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 CYYR1Q96J86 154 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 NECAB3Q96P71 396 aaPredicted RBP13.44□□□□□ -0.26
CLCN1-201ENST00000343257 ALX4Q9H161 411 aaPredicted RBP13.44□□□□□ -0.26
CLCN1-201ENST00000343257 MMP26Q9NRE1 261 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 MRPS33Q9Y291 106 aaKnown RBP13.44□□□□□ -0.26
CLCN1-201ENST00000343257 TRBV5-5A0A0J9YX44 114 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 C9orf170A2RU37 121 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 ADAP1O75689 374 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 CD74P04233 296 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 ARG1P05089 322 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 CSRP1P21291 193 aaKnown RBP13.44□□□□□ -0.26
CLCN1-201ENST00000343257 PSMB6P28072 239 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 KIR3DL2P43630 455 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 SLC9A3R2Q15599 337 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 ZNF684Q5T5D7 378 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 MDGA2Q7Z553 956 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 LYG2Q86SG7 212 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 PHB2Q99623 299 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 SULT4A1Q9BR01 284 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 STARD5Q9NSY2 213 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 WBP1LQ9NX94 342 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 C19orf53Q9UNZ5 99 aaPredicted RBP13.44□□□□□ -0.26
CLCN1-201ENST00000343257 INSL6Q9Y581 213 aa13.44□□□□□ -0.26
CLCN1-201ENST00000343257 MPDZO75970 2070 aa13.43□□□□□ -0.26
CLCN1-201ENST00000343257 YKT6O15498 198 aa13.43□□□□□ -0.26
CLCN1-201ENST00000343257 LRP3O75074 770 aa13.43□□□□□ -0.26
CLCN1-201ENST00000343257 S100A8P05109 93 aa13.43□□□□□ -0.26
CLCN1-201ENST00000343257 RBM34P42696 430 aaKnown RBP13.43□□□□□ -0.26
CLCN1-201ENST00000343257 EBPQ15125 230 aaKnown RBP13.43□□□□□ -0.26
CLCN1-201ENST00000343257 RNASE10Q5GAN6 216 aaKnown RBP13.43□□□□□ -0.26
CLCN1-201ENST00000343257 DPY19L2P2Q6ZN68 376 aa13.43□□□□□ -0.26
CLCN1-201ENST00000343257 OR52R1Q8NGF1 315 aa13.43□□□□□ -0.26
CLCN1-201ENST00000343257 FAM174AQ8TBP5 190 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms