RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 GLB1L2Q8IW92 636 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 YIPF7Q8N8F6 280 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 OR6N1Q8NGY5 312 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 NEIL3Q8TAT5 605 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 FNDC9Q8TBE3 224 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 GHSRQ92847 366 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 CPNE4Q96A23 557 aaPredicted RBP3.67□□□□□ -1.82
MCF2-201ENST00000338585 ZNF837Q96EG3 531 aaPredicted RBP3.67□□□□□ -1.82
MCF2-201ENST00000338585 ABHD6Q9BV23 337 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 PPIL3Q9H2H8 161 aaKnown RBP3.67□□□□□ -1.82
MCF2-201ENST00000338585 TPK1Q9H3S4 243 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 LDAHQ9H6V9 325 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 EXO5Q9H790 373 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 ZDHHC11Q9H8X9 412 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 SEC61A2Q9H9S3 476 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 ACKR4Q9NPB9 350 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 GLTPQ9NZD2 209 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 LUZP4Q9P127 313 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 CLEC4AQ9UMR7 237 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 UGT2A1Q9Y4X1 527 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 DMXL2Q8TDJ6 3036 aa3.67□□□□□ -1.82
MCF2-201ENST00000338585 TRGV5A0A0B4J1U4 118 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 TRBV2A0A0J9YWF9 115 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 A0A1W2PPK0 400 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 METTL15A6NJ78 407 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 H3BSH0 61 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 LINC01387J3KSC0 135 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 CDK2AP1O14519 115 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 TFECO14948 347 aaPredicted RBP3.66□□□□□ -1.82
MCF2-201ENST00000338585 OGG1O15527 345 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 CYTIPO60759 359 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 CLPXO76031 633 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 CDRT1O95170 752 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 PNPP00491 289 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 KRT8P05787 483 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 LAP3P28838 519 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 SDC2P34741 201 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 UGT2B10P36537 528 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 MAGEB1P43366 347 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 CSNK1A1P48729 337 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 GDI2P50395 445 aaKnown RBP3.66□□□□□ -1.82
MCF2-201ENST00000338585 CAV3P56539 151 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 RASGEF1BQ0VAM2 473 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 OR7E24Q6IFN5 339 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ASB18Q6ZVZ8 466 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 LINGO2Q7L985 606 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 DCXRQ7Z4W1 244 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 KBTBD8Q8NFY9 601 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 OR10S1Q8NGN2 331 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ST7LQ8TDW4 575 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 RGP1Q92546 391 aaPredicted RBP3.66□□□□□ -1.82
MCF2-201ENST00000338585 TMEM54Q969K7 222 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 PPP1R14AQ96A00 147 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ORAI1Q96D31 301 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 OR8B4Q96RC9 309 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 TAAR6Q96RI8 345 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 SF3B5Q9BWJ5 86 aaKnown RBP3.66□□□□□ -1.82
MCF2-201ENST00000338585 BARHL1Q9BZE3 327 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ELOVL3Q9HB03 270 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 SNTG1Q9NSN8 517 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 QPCTLQ9NXS2 382 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 GALNT8Q9NY28 637 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 FBXL3Q9UKT7 428 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 IGF2RP11717 2491 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 LAMA5O15230 3695 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 TRDV1A0A1B0GX56 115 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 DOK2O60496 412 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 NCR1O76036 304 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ZFPL1O95159 310 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 IGHV3-9P01782 118 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 HLA-DPB1P04440 258 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ZNF823P16415 610 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 SDHBP21912 280 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 FGF9P31371 208 aaPredicted RBP3.66□□□□□ -1.82
MCF2-201ENST00000338585 OPRL1P41146 370 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 BLVRAP53004 296 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 TAS2R43P59537 309 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 RPS11P62280 158 aaKnown RBP eCLIP3.66□□□□□ -1.82
MCF2-201ENST00000338585 EGR3Q06889 387 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 MFGE8Q08431 387 aaPredicted RBP3.66□□□□□ -1.82
MCF2-201ENST00000338585 PCK2Q16822 640 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 DGUOKQ16854 277 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ODF4Q2M2E3 257 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 SLC18B1Q6NT16 456 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 GDPGP1Q6ZNW5 385 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 CFAP77Q6ZQR2 320 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 AAED1Q7RTV5 226 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 HDDC2Q7Z4H3 204 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 C20orf196Q8IYI0 205 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 RDH10Q8IZV5 341 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ZADH2Q8N4Q0 377 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 MEIOBQ8N635 442 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 OR52N5Q8NH56 324 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 MCFD2Q8NI22 146 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 ABHD4Q8TB40 342 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 RNF128Q8TEB7 428 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 SMIM19Q96E16 107 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 DTNBP1Q96EV8 351 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 WDYHV1Q96HA8 205 aa3.66□□□□□ -1.82
MCF2-201ENST00000338585 MAP6Q96JE9 813 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms