RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MZT2AQ6P582 158 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 ASCL5Q7RTU5 278 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 KRT77Q7Z794 578 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 OR10H5Q8NGA6 315 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 ST7LQ8TDW4 575 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 C11orf40Q8WZ69 217 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 MCHR2Q969V1 340 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 PNPLA2Q96AD5 504 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 SCMH1Q96GD3 660 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 ATF6BQ99941 703 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 SH3GL3Q99963 347 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 TTTY12Q9BZ98 90 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 RCE1Q9Y256 329 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 ALPK2Q86TB3 2170 aa15.87■□□□□ 0.13
RAB39A-201ENST00000320578 TRBV5-5A0A0J9YX44 114 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 EIF1AYO14602 144 aaKnown RBP15.86■□□□□ 0.13
RAB39A-201ENST00000320578 SMAD9O15198 467 aaKnown RBP15.86■□□□□ 0.13
RAB39A-201ENST00000320578 MPZL1O95297 269 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 KLK2P20151 261 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 RPS27P42677 84 aaKnown RBP15.86■□□□□ 0.13
RAB39A-201ENST00000320578 PPP3R1P63098 170 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 BCL2A1Q16548 175 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 ATP1A1-AS1Q5TC04 95 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 BTLAQ7Z6A9 289 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 ZFP62Q8NB50 900 aaPredicted RBP15.86■□□□□ 0.13
RAB39A-201ENST00000320578 CPNE4Q96A23 557 aaPredicted RBP15.86■□□□□ 0.13
RAB39A-201ENST00000320578 C4orf45Q96LM5 186 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 OR2M2Q96R28 347 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 COMMD4Q9H0A8 199 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 ZNF552Q9H707 407 aaPredicted RBP15.86■□□□□ 0.13
RAB39A-201ENST00000320578 GLTPQ9NZD2 209 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 CYB5R1Q9UHQ9 305 aa15.86■□□□□ 0.13
RAB39A-201ENST00000320578 DVL2O14641 736 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 NKX2-8O15522 239 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 RPP14O95059 124 aaKnown RBP15.85■□□□□ 0.13
RAB39A-201ENST00000320578 RAF1P04049 648 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 ZNF181Q2M3W8 571 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 ABLIM2Q6H8Q1 611 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 LRFN4Q6PJG9 635 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 IGFL2Q6UWQ7 119 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 FOXL2NBQ6ZUU3 175 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 VASH2Q86V25 355 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 TMEM123Q8N131 208 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 ZIC4Q8N9L1 334 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 RNF133Q8WVZ7 376 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 FOXN4Q96NZ1 517 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 UCN2Q96RP3 112 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 ACKR4Q9NPB9 350 aa15.85■□□□□ 0.13
RAB39A-201ENST00000320578 ING1Q9UK53 422 aaPredicted RBP15.85■□□□□ 0.13
RAB39A-201ENST00000320578 ISPDA4D126 451 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 ZNF891A8MT65 544 aaPredicted RBP15.84■□□□□ 0.13
RAB39A-201ENST00000320578 RGS5O15539 181 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 QDPRP09417 244 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 CSNK1A1P48729 337 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 Q499Y3 187 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 HSD17B12Q53GQ0 312 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 LRRN1Q6UXK5 716 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 LRRC69Q6ZNQ3 347 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 OR13C5Q8NGS8 318 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 OR10D3Q8NH80 312 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 HSD17B8Q92506 261 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 RGP1Q92546 391 aaPredicted RBP15.84■□□□□ 0.13
RAB39A-201ENST00000320578 CCDC32Q9BV29 185 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 MIXL1Q9H2W2 232 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 PAQR5Q9NXK6 330 aaPredicted RBP15.84■□□□□ 0.13
RAB39A-201ENST00000320578 A0A0G2JK05 382 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 GPR171O14626 319 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 SRSF10O75494 262 aaKnown RBP15.84■□□□□ 0.13
RAB39A-201ENST00000320578 UPK1BO75841 260 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 RAB3BP20337 219 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 PTBP1P26599 531 aaKnown RBP eCLIP15.84■□□□□ 0.13
RAB39A-201ENST00000320578 CLDN15P56746 228 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 LSM6P62312 80 aaKnown RBP15.84■□□□□ 0.13
RAB39A-201ENST00000320578 FAM27D1Q5T7N8 215 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 METAP1DQ6UB28 335 aaPredicted RBP15.84■□□□□ 0.13
RAB39A-201ENST00000320578 GALNTL5Q7Z4T8 443 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 DCXRQ7Z4W1 244 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 PRSS35Q8N3Z0 413 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 TMEM251Q8N6I4 163 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 TMEM178AQ8NBL3 297 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 DERL3Q96Q80 235 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 OR14A2Q96R54 314 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 HES7Q9BYE0 225 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 C1orf198Q9H425 327 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 ABCB9Q9NP78 766 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 FOXD3Q9UJU5 478 aaPredicted RBP15.84■□□□□ 0.13
RAB39A-201ENST00000320578 ADAM30Q9UKF2 790 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 MUC6Q6W4X9 2439 aa15.84■□□□□ 0.13
RAB39A-201ENST00000320578 ZNF716A6NP11 495 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 PDCD5O14737 125 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 CXCL13O43927 109 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 MEOX1P50221 254 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 LHX2P50458 406 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 CAV3P56539 151 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 CLN3Q13286 438 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 RGS21Q2M5E4 152 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 SLC22A16Q86VW1 577 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 NR2C2APQ86WQ0 139 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 CATSPERDQ86XM0 798 aa15.83■□□□□ 0.12
RAB39A-201ENST00000320578 LAX1Q8IWV1 398 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms