RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ZNF32P17041 273 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 PCMT1P22061 227 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 COL8A2P25067 703 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 RPL4P36578 427 aaKnown RBP15.21■□□□□ 0.03
TPM1-203ENST00000317516 FMODQ06828 376 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 TMPRSS11FQ6ZWK6 438 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 IGFN1Q86VF2 1251 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 LRRC75AQ8NAA5 344 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 CPEB3Q8NE35 698 aaKnown RBP15.21■□□□□ 0.03
TPM1-203ENST00000317516 OR1J1Q8NGS3 322 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 NABP1Q96AH0 204 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 GMPR2Q9P2T1 348 aaKnown RBP15.21■□□□□ 0.03
TPM1-203ENST00000317516 GRHPRQ9UBQ7 328 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 TMEM5Q9Y2B1 443 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 IGKV1D-43A0A0B4J1Z2 117 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 C5orf49A4QMS7 147 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 XKRYO14609 159 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 PHF1O43189 567 aaPredicted RBP15.2■□□□□ 0.02
TPM1-203ENST00000317516 AHCYL1O43865 530 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 CLPTM1O96005 669 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 CST2P09228 141 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 GCH1P30793 250 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 PSME3P61289 254 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 PSG4Q00888 419 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 TEKQ02763 1124 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 TRIP10Q15642 601 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 CR1LQ2VPA4 569 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 ALKBH6Q3KRA9 238 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 ZNF718Q3SXZ3 478 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 ZBED5Q49AG3 693 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 TREML1Q86YW5 311 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 FAM156AQ8NDB6 213 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 POM121L2Q96KW2 1035 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 TSPAN32Q96QS1 320 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 WACQ9BTA9 647 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 NMNAT1Q9HAN9 279 aaPredicted RBP15.2■□□□□ 0.02
TPM1-203ENST00000317516 NKIRAS2Q9NYR9 191 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 ENPP4Q9Y6X5 453 aa15.2■□□□□ 0.02
TPM1-203ENST00000317516 C12orf71A8MTZ7 269 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 B4DSR2 109 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 PPIHO43447 177 aaKnown RBP15.19■□□□□ 0.02
TPM1-203ENST00000317516 PRSS23O95084 383 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 LAP3P28838 519 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 PRDX6P30041 224 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 CDH15P55291 814 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 ERVS71-1P61550 626 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 ERVK-25P63136 954 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 TBPL2Q6SJ96 375 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 ARL9Q6T311 187 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 SYT9Q86SS6 491 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 MEX3DQ86XN8 651 aaKnown RBP15.19■□□□□ 0.02
TPM1-203ENST00000317516 OR13C2Q8NGS9 318 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 AKR7LQ8NHP1 331 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 C1orf159Q96HA4 380 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 SOX7Q9BT81 388 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 OR2H1Q9GZK4 316 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 NSRP1Q9H0G5 558 aaKnown RBP15.19■□□□□ 0.02
TPM1-203ENST00000317516 SPAG4Q9NPE6 437 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 KRCC1Q9NPI7 259 aaPredicted RBP15.19■□□□□ 0.02
TPM1-203ENST00000317516 ZNF275Q9NSD4 429 aaPredicted RBP15.19■□□□□ 0.02
TPM1-203ENST00000317516 DECR2Q9NUI1 292 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 ABCD2Q9UBJ2 740 aa15.19■□□□□ 0.02
TPM1-203ENST00000317516 TMEFF2Q9UIK5 374 aaPredicted RBP15.19■□□□□ 0.02
TPM1-203ENST00000317516 SAMD4AQ9UPU9 718 aaKnown RBP15.19■□□□□ 0.02
TPM1-203ENST00000317516 FBN1P35555 2871 aaKnown RBP15.18■□□□□ 0.02
TPM1-203ENST00000317516 A0A1W2PPL8 197 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 A0A1W2PRQ8 180 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 TPD52L2O43399 206 aaKnown RBP15.18■□□□□ 0.02
TPM1-203ENST00000317516 IGHV3-13P01766 116 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 TFP02787 698 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 H1F0P07305 194 aaKnown RBP15.18■□□□□ 0.02
TPM1-203ENST00000317516 CD14P08571 375 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 NCK1P16333 377 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 MSR1P21757 451 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 FUT4P22083 530 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 IL2RGP31785 369 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 MAGEB1P43366 347 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 GPR4P46093 362 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 CCL8P80075 99 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 FHL1Q13642 323 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 CCNIQ14094 377 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 DGCR6Q14129 220 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 KRT72Q14CN4 511 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 GLYATQ6IB77 296 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 FOXL2NBQ6ZUU3 175 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 IL17RELQ6ZVW7 336 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 CLDN22Q8N7P3 220 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 MYLK2Q9H1R3 596 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 ELOVL3Q9HB03 270 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 ADA2Q9NZK5 511 aa15.18■□□□□ 0.02
TPM1-203ENST00000317516 LOC100509620A0A075B734 347 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 PLSCR5A0PG75 271 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 RHCEP18577 417 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 LIPAP38571 399 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 ARHGDIAP52565 204 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 DVL1P1P54792 670 aaPredicted RBP15.17■□□□□ 0.02
TPM1-203ENST00000317516 FAM209AQ5JX71 171 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 CPLX4Q7Z7G2 160 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 SLC7A13Q8TCU3 470 aa15.17■□□□□ 0.02
TPM1-203ENST00000317516 YIPF5Q969M3 257 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms