RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 B4GALT1P15291 398 aa11.9□□□□□ -0.5
ABR-202ENST00000302538 FOXF1Q12946 379 aa11.9□□□□□ -0.5
ABR-202ENST00000302538 SLC9A3R2Q15599 337 aa11.9□□□□□ -0.5
ABR-202ENST00000302538 STPG1Q5TH74 334 aa11.9□□□□□ -0.5
ABR-202ENST00000302538 CISD2Q8N5K1 135 aaKnown RBP11.9□□□□□ -0.5
ABR-202ENST00000302538 MAFIPQ8WZ33 124 aa11.9□□□□□ -0.5
ABR-202ENST00000302538 A8MXE2 369 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 ACTBL2Q562R1 376 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 LPCAT3Q6P1A2 487 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 CT55Q8WUE5 264 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 GHSRQ92847 366 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 GABRG3Q99928 467 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 SMIM3Q9BZL3 60 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 CACNG2Q9Y698 323 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 F5H5P2 479 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 SIRPB1O00241 398 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 GABRPO00591 440 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 UBFD1O14562 309 aaKnown RBP11.89□□□□□ -0.51
ABR-202ENST00000302538 SPRY3O43610 288 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 ZNF83P51522 516 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 RAB11AP62491 216 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 DUSP7Q16829 419 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 PRSS36Q5K4E3 855 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 PTRH1Q86Y79 214 aaKnown RBP11.89□□□□□ -0.51
ABR-202ENST00000302538 KIRREL1Q96J84 757 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 THAP7Q9BT49 309 aaPredicted RBP11.89□□□□□ -0.51
ABR-202ENST00000302538 NUDT9Q9BW91 350 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 EXO1Q9UQ84 846 aaKnown RBP11.89□□□□□ -0.51
ABR-202ENST00000302538 ASB4Q9Y574 426 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 M0R135 149 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 TSPAN15O95858 294 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 RAB40ALP0C0E4 278 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 NR4A2P43354 598 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 RBP2P50120 134 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 LUMP51884 338 aaPredicted RBP11.89□□□□□ -0.51
ABR-202ENST00000302538 SLC35D3Q5M8T2 416 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 SAXO2Q658L1 398 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 PIWIL3Q7Z3Z3 882 aaKnown RBP11.89□□□□□ -0.51
ABR-202ENST00000302538 ZNF679Q8IYX0 411 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 RAB40AQ8WXH6 277 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 TRMT61AQ96FX7 289 aaKnown RBP11.89□□□□□ -0.51
ABR-202ENST00000302538 ZNF799Q96GE5 643 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 LHX9Q9NQ69 397 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 MED29Q9NX70 200 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 CASP8AP2Q9UKL3 1982 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 CLDN24A6NM45 220 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 THBS1P07996 1170 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 SLC6A12P48065 614 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 RAC1P63000 192 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 GLIPR1L1Q6UWM5 242 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 CLDN22Q8N7P3 220 aa11.89□□□□□ -0.51
ABR-202ENST00000302538 ESRP2Q9H6T0 727 aaKnown RBP11.89□□□□□ -0.51
ABR-202ENST00000302538 M0QZ24 198 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 CLDN1O95832 211 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 IL1AP01583 271 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 FGFBP1Q14512 234 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 SHEQ5VZ18 495 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 NKAIN4Q8IVV8 208 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 NMNAT2Q9BZQ4 307 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 RIMS4Q9H426 269 aaPredicted RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 HEYLQ9NQ87 328 aaPredicted RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 SLC22A23A1A5C7 686 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 SERTM1A2A2V5 107 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 TNFRSF1AP19438 455 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 ARNTP27540 789 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 MLLT11Q13015 90 aaPredicted RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 METTL11BQ5VVY1 283 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 BRICD5Q6PL45 260 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 CORO6Q6QEF8 472 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 DRAXINQ8NBI3 349 aaPredicted RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 OR1J1Q8NGS3 322 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 VN1R1Q9GZP7 353 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 UBQLN3Q9H347 655 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 UBQLN2Q9UHD9 624 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 HDGFL3Q9Y3E1 203 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 A0A087WV62 115 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 OR6C6A6NF89 314 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 P2RX6O15547 441 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 C21orf33P30042 268 aaPredicted RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 ACVR1Q04771 509 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 SPRED1Q7Z699 444 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 GTPBP8Q8N3Z3 284 aaPredicted RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 SLAMF6Q96DU3 332 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 ARSGQ96EG1 525 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 AMBRA1Q9C0C7 1298 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 UNKLQ9H9P5 680 aaKnown RBP11.88□□□□□ -0.51
ABR-202ENST00000302538 EBF1Q9UH73 591 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 MEIKINA0A087WXM9 373 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 DLL1O00548 723 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 ZNF728P0DKX0 622 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 GCAP28676 217 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 TRIM23P36406 574 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 PLK5Q496M5 336 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 CLVS2Q5SYC1 327 aa11.88□□□□□ -0.51
ABR-202ENST00000302538 JMJD6Q6NYC1 403 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms