RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SFXN2Q96NB2 322 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 TMED9Q9BVK6 235 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 CDADC1Q9BWV3 514 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 ZNF703Q9H7S9 590 aaPredicted RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 LIN7BQ9HAP6 207 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 MRPL22Q9NWU5 206 aaKnown RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 TMEM14AQ9Y6G1 99 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 A8MV72 311 aaPredicted RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 NME2P1O60361 137 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 TRAPPC6AO75865 159 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 SP1P08047 785 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 ALOX5APP20292 161 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 NME2P22392 152 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 AGFG1P52594 562 aaKnown RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 CLN3Q13286 438 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 ZNF404Q494X3 552 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 ESCO2Q56NI9 601 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 ARL9Q6T311 187 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 ASB18Q6ZVZ8 466 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 GPAT4Q86UL3 456 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 GGNQ86UU5 652 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 SYT14Q8NB59 555 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 OR6X1Q8NH79 312 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 MCFD2Q8NI22 146 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 MARVELD3Q96A59 401 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 PGLYRP3Q96LB9 341 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 ADAD1Q96M93 576 aaKnown RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 KCTD7Q96MP8 289 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 DCLRE1CQ96SD1 692 aaKnown RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 NAA11Q9BSU3 229 aaPredicted RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 MMP27Q9H306 513 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 CCDC86Q9H6F5 360 aaKnown RBP13.87□□□□□ -0.19
LSM6-201ENST00000296581 B4GALT7Q9UBV7 327 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 GNG8Q9UK08 70 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 GSTK1Q9Y2Q3 226 aa13.87□□□□□ -0.19
LSM6-201ENST00000296581 PCP4L1A6NKN8 68 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 LINC01387J3KSC0 135 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 GABRPO00591 440 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 PHYHO14832 338 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 VAMP5O95183 116 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 HPNP05981 417 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 CD1AP06126 327 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 PRKAR1AP10644 381 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 FOSL1P15407 271 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 ZNF43P17038 809 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 ATF4P18848 351 aaPredicted RBP13.86□□□□□ -0.19
LSM6-201ENST00000296581 RPS19P39019 145 aaKnown RBP13.86□□□□□ -0.19
LSM6-201ENST00000296581 GFRA1P56159 465 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 GLO1Q04760 184 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 POU4F3Q15319 338 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 TRAM1Q15629 374 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 SLC25A25Q6KCM7 469 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 RPTNQ6XPR3 784 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 DPY19L4Q7Z388 723 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 OTOSQ8NHW6 89 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 CCDC120Q96HB5 630 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 MED18Q9BUE0 208 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 EMC6Q9BV81 110 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 ZNF552Q9H707 407 aaPredicted RBP13.86□□□□□ -0.19
LSM6-201ENST00000296581 COA3Q9Y2R0 106 aaPredicted RBP13.86□□□□□ -0.19
LSM6-201ENST00000296581 KLF13Q9Y2Y9 288 aaPredicted RBP13.86□□□□□ -0.19
LSM6-201ENST00000296581 GRIP1Q9Y3R0 1128 aa13.86□□□□□ -0.19
LSM6-201ENST00000296581 TNFSF11O14788 317 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 KHDRBS3O75525 346 aaKnown RBP13.85□□□□□ -0.19
LSM6-201ENST00000296581 SCO1O75880 301 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 IL1AP01583 271 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 PSKH1P11801 424 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 SIRPAP78324 504 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 FMODQ06828 376 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 CDK5R1Q15078 307 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 TOR2AQ5JU69 321 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 RPL22L1Q6P5R6 122 aaKnown RBP13.85□□□□□ -0.19
LSM6-201ENST00000296581 TMEM91Q6ZNR0 172 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 LHFPL5Q8TAF8 219 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 RPS4Y2Q8TD47 263 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 HAS2Q92819 552 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 SLC25A44Q96H78 314 aaPredicted RBP13.85□□□□□ -0.19
LSM6-201ENST00000296581 ADGRG7Q96K78 797 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 HDHD5Q9BXW7 423 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 LAMP5Q9UJQ1 280 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 IGKV1D-43A0A0B4J1Z2 117 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 SLC35F4A4IF30 521 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 BET1O15155 118 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 RGS9O75916 674 aaPredicted RBP13.85□□□□□ -0.19
LSM6-201ENST00000296581 ABHD16AO95870 558 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 HLA-DQA2P01906 255 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 YES1P07947 543 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 PGA4P0DJD7 388 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 PGA3P0DJD8 388 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 SOX6P35712 828 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 TGM4P49221 684 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 CLDN20P56880 219 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 RAC3P60763 192 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 EGR3Q06889 387 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 HYAL4Q2M3T9 481 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 SHEQ5VZ18 495 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 ESPNLQ6ZVH7 1005 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 NOXO1Q8NFA2 376 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 SLC26A10Q8NG04 563 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 LRRC20Q8TCA0 184 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms