RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF439Q8NDP4 499 aa11.48□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF707Q96C28 371 aaPredicted RBP11.48□□□□□ -0.57
SLC6A1-201ENST00000287766 DERL3Q96Q80 235 aa11.48□□□□□ -0.57
SLC6A1-201ENST00000287766 PTDSS2Q9BVG9 487 aa11.48□□□□□ -0.57
SLC6A1-201ENST00000287766 CYB5R1Q9UHQ9 305 aa11.48□□□□□ -0.57
SLC6A1-201ENST00000287766 SLC7A11Q9UPY5 501 aa11.48□□□□□ -0.57
SLC6A1-201ENST00000287766 UNC13CQ8NB66 2214 aa11.48□□□□□ -0.57
SLC6A1-201ENST00000287766 OR2T7P0C7T2 308 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 GLI4P10075 376 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CPN1P15169 458 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 SFTPDP35247 375 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 KCNAB1Q14722 419 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 TRAPPC6BQ86SZ2 158 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 KIAA1958Q8N8K9 716 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 OR2T27Q8NH04 317 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 RAB39BQ96DA2 213 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 PLA2G2FQ9BZM2 168 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 TSPAN10Q9H1Z9 355 aaPredicted RBP11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 NPFFR2Q9Y5X5 522 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CEP350Q5VT06 3117 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 KIR2DS5A0A0G2JLQ3 304 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 A0A0G2JNG1 304 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 SERTM1A2A2V5 107 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 KIR2DS3K7RE56 304 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 EMDP50402 254 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 RAB38P57729 211 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CDK5Q00535 292 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 KIR2DS5Q14953 304 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 OR7A5Q15622 319 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 IAH1Q2TAA2 248 aaPredicted RBP11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CLLU1Q5K131 121 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 LYPD8Q6UX82 237 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 SLC35F3Q8IY50 421 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 WDR34Q96EX3 536 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 PLEKHA3Q9HB20 300 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CRLF2Q9HC73 371 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CMC2Q9NRP2 79 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 UBQLN4Q9NRR5 601 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 NCDNQ9UBB6 729 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF646O15015 1829 aaPredicted RBP11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF236Q9UL36 1845 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 SOD1P00441 154 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CORO6Q6QEF8 472 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 THSD4Q6ZMP0 1018 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CDH26Q8IXH8 852 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 DIO2Q92813 273 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 SLC22A11Q9NSA0 550 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 SIP14410 1827 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 OR6C76A6NM76 312 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 OR2C1O95371 312 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 NR2C1P13056 603 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 IFNGR1P15260 489 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CRYBA2P53672 197 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 C9orf50Q5SZB4 431 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 FBXW12Q6X9E4 464 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 OR4K15Q8NH41 348 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 AUNIPQ9H7T9 357 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 SLC25A19Q9HC21 320 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 FGF20Q9NP95 211 aaPredicted RBP11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 INPP5EQ9NRR6 644 aa11.47□□□□□ -0.57
SLC6A1-201ENST00000287766 RTTNQ86VV8 2226 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 DCTN6O00399 190 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 PHYHO14832 338 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 RAB4AP20338 218 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 RPS18P62269 152 aaKnown RBP11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 HMGN3Q15651 99 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 C19orf47Q8N9M1 422 aaKnown RBP11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 PHOSPHO2Q8TCD6 241 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 WDR89Q96FK6 387 aaPredicted RBP11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 DUSP22Q9NRW4 184 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 WIF1Q9Y5W5 379 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 SLC22A7Q9Y694 548 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 AHCTF1Q8WYP5 2266 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 SERPINA2P20848 420 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 GABRR1P24046 479 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 MELKQ14680 651 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 RTL10Q7L3V2 364 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 PRR18Q8N4B5 295 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 SENP5Q96HI0 755 aaPredicted RBP11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 TRAF4Q9BUZ4 470 aaPredicted RBP11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 ANKRD19PQ9H560 264 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 FAM86C1Q9NVL1 165 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 NEUROG3Q9Y4Z2 214 aa11.46□□□□□ -0.57
SLC6A1-201ENST00000287766 F5H5K5 113 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 ZNF264O43296 627 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 DNAJB6O75190 326 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 EML2O95834 649 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 SLC35E2P0CK97 266 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 PNMTP11086 282 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 SRMP19623 302 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 PPP1CAP62136 330 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 DUSP8Q13202 625 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 TESK1Q15569 626 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 LIPNQ5VXI9 398 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 ZNF704Q6ZNC4 412 aaPredicted RBP11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 TMEM156Q8N614 296 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms