RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MYRFQ9Y2G1 1151 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 ADGRG4Q8IZF6 3080 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 A0A096LPE4 126 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 A0A1W2PPZ6 126 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 SBK2P0C263 348 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 NAA10P41227 235 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 TMED1Q13445 227 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 KCNMB1Q16558 191 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 SGCAQ16586 387 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 LRRC18Q8N456 261 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 SLC22A24Q8N4F4 322 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 COQ3Q9NZJ6 369 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF224Q9NZL3 707 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 MYO18BQ8IUG5 2567 aa19.12■□□□□ 0.65
PDLIM3-203ENST00000284771 RTTNQ86VV8 2226 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 SNTNA6NMZ2 147 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 J3QRE1 110 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 ZG16O60844 167 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 HRGP04196 525 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 CCDC159P0C7I6 412 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 FAM27E3Q08E93 113 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 ENDOGQ14249 297 aaKnown RBP19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 FAM27BQ5VT28 67 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 KLHL24Q6TFL4 600 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 STAC2Q6ZMT1 411 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF813Q6ZN06 617 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 ERI1Q8IV48 349 aaKnown RBP19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 SKA3Q8IX90 412 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 OR1K1Q8NGR3 316 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 LILRB4Q8NHJ6 448 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 SH3GL3Q99963 347 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF416Q9BWM5 594 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 SIAEQ9HAT2 523 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 FKBP14Q9NWM8 211 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 SLC5A6Q9Y289 635 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 EXOGQ9Y2C4 368 aaKnown RBP19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 SPTBN1Q01082 2364 aaKnown RBP19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 PTGES3LE9PB15 166 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF593O00488 134 aaPredicted RBP19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 FAM20BO75063 409 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 RAD51DO75771 328 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 BLVRAP53004 296 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 P2RY6Q15077 328 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 GABRA6Q16445 453 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 PCK2Q16822 640 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 SFRP5Q5T4F7 317 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 LCN1P1Q5VSP4 162 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 DPY19L4Q7Z388 723 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 FGFBP3Q8TAT2 258 aa19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 BCL2L2Q92843 193 aaPredicted RBP19.11■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF503-AS2A6NEH8 195 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 MSR1P21757 451 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 CSNK2BP67870 215 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 ADAM8P78325 824 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 SLC35A2P78381 396 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 PIGFQ07326 219 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 HIKESHIQ53FT3 197 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF540Q8NDQ6 660 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 FBXO17Q96EF6 278 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 INTS14Q96SY0 518 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 DUSP21Q9H596 190 aa19.1■□□□□ 0.65
PDLIM3-203ENST00000284771 NKX2-6A6NCS4 301 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 PATE4P0C8F1 98 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 NPR2P20594 1047 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 C21orf33P30042 268 aaPredicted RBP19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 RAB40BQ12829 278 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 NRN1LQ496H8 165 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 RBM48Q5RL73 367 aaKnown RBP19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 MTFR2Q6P444 385 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 CORO6Q6QEF8 472 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 AHSA2Q719I0 299 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 RFLNBQ8N5W9 214 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 OR52I1Q8NGK6 324 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 ITLN2Q8WWU7 325 aaPredicted RBP19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 ASB5Q8WWX0 329 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 CNN2Q99439 309 aaKnown RBP19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 GALNT8Q9NY28 637 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 CYB5R1Q9UHQ9 305 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 LHFPL6Q9Y693 200 aa19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 UBR5O95071 2799 aaPredicted RBP19.09■□□□□ 0.65
PDLIM3-203ENST00000284771 OR8G3PP0DMU2 310 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 GUCA1AP43080 201 aaPredicted RBP19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 ENTPD1P49961 510 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 SH3BGRP55822 239 aaPredicted RBP19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 LSM6P62312 80 aaKnown RBP19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 ST3GAL4Q11206 333 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 TEX30Q5JUR7 227 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 ANKRD16Q6P6B7 361 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 SLC16A9Q7RTY1 509 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 LINC00346Q8IVM7 164 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 OR6N2Q8NGY6 317 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 BOD1Q96IK1 185 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 KCNG2Q9UJ96 466 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 COPS3Q9UNS2 423 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 KLHDC2Q9Y2U9 406 aa19.08■□□□□ 0.65
PDLIM3-203ENST00000284771 USP9XQ93008 2570 aaPredicted RBP19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 FAM90A27PA6NNH2 459 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 HTR1AP08908 422 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 ZNF823P16415 610 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 PSMB1P20618 241 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms