RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 IGFALSP35858 605 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SLC6A9P48067 706 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 PTTG1IPP53801 180 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 RAE1P78406 368 aaKnown RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 NR0B2Q15466 257 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 GUK1Q16774 197 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 Q6ZRG5 221 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SSX7Q7RTT5 188 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 GCNT2Q8N0V5 402 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 OR13D1Q8NGV5 346 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 LYPD6BQ8NI32 183 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 MRGPRDQ8TDS7 321 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 RAB40AQ8WXH6 277 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 ZBTB8AQ96BR9 441 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 CLUHP3Q96NS8 147 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 MYADMQ96S97 322 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SYNPO2LQ9H987 977 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 NCDNQ9UBB6 729 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 FARSAQ9Y285 508 aaKnown RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 V9GYS6 101 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 MSGN1A6NI15 193 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 NKX6-3A6NJ46 265 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 MEIS3P2A8K0S8 358 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 EEF1E1-BLOC1S5C9J1V9 151 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 H7C4K7 107 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 GAPDHSO14556 408 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 CCL25O15444 150 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 DFFBO76075 338 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 GLSO94925 669 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 APODP05090 189 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 CTSLP07711 333 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 CTSHP09668 335 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 AKAIN1P0CW23 69 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 HLA-GP17693 338 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SRMP19623 302 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 IGFBP6P24592 240 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SNCAP37840 140 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SULT1A2P50226 295 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 IDH3GP51553 393 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 HAGHQ16775 308 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 YOD1Q5VVQ6 348 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SLC22A25Q6T423 547 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SLC35E3Q7Z769 313 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 VRK2Q86Y07 508 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF433Q8N7K0 673 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 LKAAEAR1Q8TD35 194 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 AUTS2Q8WXX7 1259 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SUSD6Q92537 303 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 SNX22Q96L94 193 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF2Q9BSG1 426 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 EIF5A2Q9GZV4 153 aaKnown RBP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 NRIP3Q9NQ35 241 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 TAS2R8Q9NYW2 309 aa8.37□□□□□ -1.07
PDGFC-201ENST00000274071 PUS1Q9Y606 427 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDGFC-201ENST00000274071 A0A087WUU8 490 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 TRBV6-7A0A0A0MS04 114 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 A6NJY4 79 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 DHRS7CA6NNS2 312 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 SYT7O43581 403 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 SMPD2O60906 423 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 NTN1O95631 604 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 AIFM1O95831 613 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 GPANK1O95872 356 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 IGHEP01854 428 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 HLA-AP01891 365 aaKnown RBP8.36□□□□□ -1.07
PDGFC-201ENST00000274071 GALTP07902 379 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 MELTFP08582 738 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 CST2P09228 141 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 CYBAP13498 195 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 FLT3LGP49771 235 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 RPS11P62280 158 aaKnown RBP eCLIP8.36□□□□□ -1.07
PDGFC-201ENST00000274071 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
PDGFC-201ENST00000274071 TUSC3Q13454 348 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 GXYLT1Q4G148 440 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 PRAMEF8Q5VWM4 474 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 PRAMEF7Q5VXH5 474 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 GALNTL5Q7Z4T8 443 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 DCXRQ7Z4W1 244 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 TAAR8Q969N4 342 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 SMOQ99835 787 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 SLC17A9Q9BYT1 436 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 MED20Q9H944 212 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 PITPNC1Q9UKF7 332 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 CCDC163A0A0D9SF12 145 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 TK1P04183 234 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 NTSP30990 170 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 TSFMP43897 325 aaKnown RBP8.36□□□□□ -1.07
PDGFC-201ENST00000274071 NOVA1P51513 510 aaKnown RBP8.36□□□□□ -1.07
PDGFC-201ENST00000274071 TAS2R43P59537 309 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 GUCA2AQ02747 115 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 RAB41Q5JT25 222 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF705AQ6ZN79 300 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-201ENST00000274071 LINC00471Q8N535 108 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 C11orf42Q8N5U0 333 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 C15orf40Q8WUR7 153 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 MITD1Q8WV92 249 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 SMPDL3AQ92484 453 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 MIB2Q96AX9 1013 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 TMEM19Q96HH6 336 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 GNRHR2Q96P88 292 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms