RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 QDPRP09417 244 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 SDC2P34741 201 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 SOX6P35712 828 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 OPRL1P41146 370 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 CSNK1A1P48729 337 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 BMXP51813 675 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 DYNC1I2Q13409 638 aaKnown RBP14.52□□□□□ -0.08
TPM1-201ENST00000267996 RNFT1Q5M7Z0 435 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 C10orf128Q5T292 105 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 FDX2Q6P4F2 183 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 LRRC69Q6ZNQ3 347 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 ZNF679Q8IYX0 411 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 SNIP1Q8TAD8 396 aaKnown RBP14.52□□□□□ -0.08
TPM1-201ENST00000267996 ST7LQ8TDW4 575 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 ABTB1Q969K4 478 aaPredicted RBP14.52□□□□□ -0.08
TPM1-201ENST00000267996 MAP6Q96JE9 813 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 SCNM1Q9BWG6 230 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 FOXD3Q9UJU5 478 aaPredicted RBP14.52□□□□□ -0.08
TPM1-201ENST00000267996 IKZF2Q9UKS7 526 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 UGT2A1Q9Y4X1 527 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 FLVCR1Q9Y5Y0 555 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 ZNF407Q9C0G0 2248 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 A0A075B6Q4 140 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 TRAV17A0A0B4J275 112 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 DLL1O00548 723 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 DVL2O14641 736 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 SPINK2P20155 84 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 RPS11P62280 158 aaKnown RBP eCLIP14.52□□□□□ -0.09
TPM1-201ENST00000267996 ALKBH1Q13686 389 aaKnown RBP14.52□□□□□ -0.09
TPM1-201ENST00000267996 EIF2B1Q14232 305 aaKnown RBP14.52□□□□□ -0.09
TPM1-201ENST00000267996 KCTD18Q6PI47 426 aaPredicted RBP14.52□□□□□ -0.09
TPM1-201ENST00000267996 FOXL2NBQ6ZUU3 175 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.52□□□□□ -0.09
TPM1-201ENST00000267996 C20orf196Q8IYI0 205 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 TEX19Q8NA77 164 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 OR52N5Q8NH56 324 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 NEIL3Q8TAT5 605 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 ROBO4Q8WZ75 1007 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 ZNF845Q96IR2 970 aaPredicted RBP14.52□□□□□ -0.09
TPM1-201ENST00000267996 ELOVL3Q9HB03 270 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 AKIP1Q9NQ31 210 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 SNTG1Q9NSN8 517 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 CYB5R1Q9UHQ9 305 aa14.52□□□□□ -0.09
TPM1-201ENST00000267996 DNAJC13O75165 2243 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 SHISA3A0PJX4 238 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 SERPINA3P01011 423 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 ITGB2P05107 769 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 CLEC2LP0C7M8 214 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 RORCP51449 518 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 ACSM3Q53FZ2 586 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 PHYHD1Q5SRE7 291 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 UNQ9370/PRO34162Q6UXP9 181 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 FCRLAQ7L513 359 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 MEIOBQ8N635 442 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 OR2G2Q8NGZ5 317 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 RNF128Q8TEB7 428 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 HSD17B8Q92506 261 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 PNPLA2Q96AD5 504 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 PPIL3Q9H2H8 161 aaKnown RBP14.51□□□□□ -0.09
TPM1-201ENST00000267996 PAQR5Q9NXK6 330 aaPredicted RBP14.51□□□□□ -0.09
TPM1-201ENST00000267996 FRRS1LQ9P0K9 344 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 LIPGQ9Y5X9 500 aa14.51□□□□□ -0.09
TPM1-201ENST00000267996 IGKV3D-15A0A087WSY6 115 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 TMCC2O75069 709 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 RPP14O95059 124 aaKnown RBP14.5□□□□□ -0.09
TPM1-201ENST00000267996 NTF4P34130 210 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 MTNR1BP49286 362 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 SELENOPP49908 381 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 ZNF829Q3KNS6 432 aaPredicted RBP14.5□□□□□ -0.09
TPM1-201ENST00000267996 DEGS2Q6QHC5 323 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 IGFL3Q6UXB1 125 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 LRRN1Q6UXK5 716 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 OR10H5Q8NGA6 315 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 OR6N1Q8NGY5 312 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 PDCD1LG2Q9BQ51 273 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 MROQ9BYG7 248 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 ZNF281Q9Y2X9 895 aa14.5□□□□□ -0.09
TPM1-201ENST00000267996 A0A1W2PPL8 197 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 OR4C45A6NMZ5 311 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 ZNF254O75437 659 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 GATBO75879 557 aaKnown RBP14.49□□□□□ -0.09
TPM1-201ENST00000267996 ZFPL1O95159 310 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 WNT11O96014 354 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 MXD1Q05195 221 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 RASGEF1BQ0VAM2 473 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 ZMAT1Q5H9K5 638 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 PAMR1Q6UXH9 720 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 DCXRQ7Z4W1 244 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 CEACAM19Q7Z692 300 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 MFSD4AQ8N468 514 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 OR13C5Q8NGS8 318 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 RNF133Q8WVZ7 376 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 S100ZQ8WXG8 99 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 RGP1Q92546 391 aaPredicted RBP14.49□□□□□ -0.09
TPM1-201ENST00000267996 PHYHIPQ92561 330 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 TMEM45BQ96B21 275 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 C4orf45Q96LM5 186 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 DEFB127Q9H1M4 99 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 PLGRKTQ9HBL7 147 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 POLE4Q9NR33 117 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms