RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PBDC1Q9BVG4 233 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 PCP4L1A6NKN8 68 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF254O75437 659 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 AKR1C8PQ5T2L2 129 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 SYS1Q8N2H4 156 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 OR1N1Q8NGS0 311 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 VN1R1Q9GZP7 353 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 A0A1W2PQF6 199 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 C4orf47A7E2U8 309 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 RAF1P04049 648 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 QDPRP09417 244 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 PTPN6P29350 595 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 AGERQ15109 404 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 TMEM81Q6P7N7 255 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 ADGRE4PQ86SQ3 457 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 OR2L13Q8N349 312 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 SLC25A46Q96AG3 418 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 MRGPRX4Q96LA9 322 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 ZMAT3Q9HA38 289 aaKnown RBP14.03□□□□□ -0.16
TIMP3-201ENST00000266085 MED29Q9NX70 200 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 LOC100289279A0A1B0GTE1 492 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 RPS27P42677 84 aaKnown RBP14.03□□□□□ -0.16
TIMP3-201ENST00000266085 PRAMEF9Q5VWM5 478 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF585AQ6P3V2 769 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 FAM71CQ8NEG0 241 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 DUSP13Q9UII6 198 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 TP53TG5Q9Y2B4 290 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 RGPD4Q7Z3J3 1758 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 PCM1Q15154 2024 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 SERTM1A2A2V5 107 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 CXCL13O43927 109 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 TIMM8AO60220 97 aaPredicted RBP14.03□□□□□ -0.16
TIMP3-201ENST00000266085 ACHEP22303 614 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 SLC10A1Q14973 349 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF425Q6IV72 752 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 ANGPTL5Q86XS5 388 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 UCN3Q969E3 161 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 PIGTQ969N2 578 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 ZPBPQ9BS86 351 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 TSPAN10Q9H1Z9 355 aaPredicted RBP14.03□□□□□ -0.16
TIMP3-201ENST00000266085 HRH3Q9Y5N1 445 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 SCN10AQ9Y5Y9 1956 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 A0A1B0GV50 99 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 GPX5O75715 221 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 UBBP0CG47 229 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 GABRA2P47869 451 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 HCCSP53701 268 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 EMC7Q9NPA0 242 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 NDUFB11Q9NX14 153 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 RAB22AQ9UL26 194 aa14.03□□□□□ -0.16
TIMP3-201ENST00000266085 BET1O15155 118 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 SURF4O15260 269 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF780AO75290 641 aaPredicted RBP14.02□□□□□ -0.16
TIMP3-201ENST00000266085 NKX2-2O95096 273 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 TAS2R20P59543 309 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 STEAP1BQ6NZ63 245 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 WDR88Q6ZMY6 472 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 SPACA9Q96E40 222 aaPredicted RBP14.02□□□□□ -0.16
TIMP3-201ENST00000266085 TXNIPQ9H3M7 391 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 SLA2Q9H6Q3 261 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 ETV6P41212 452 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 BBS1Q8NFJ9 593 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 HMGCLL1Q8TB92 370 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 FSCN3Q9NQT6 498 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 SLC22A11Q9NSA0 550 aa14.02□□□□□ -0.16
TIMP3-201ENST00000266085 FOCADQ5VW36 1801 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 SULT1B1O43704 296 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 TSPAN15O95858 294 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 CPEP16870 476 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 RPS18P62269 152 aaKnown RBP14.02□□□□□ -0.17
TIMP3-201ENST00000266085 SLC9A3R2Q15599 337 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 THEM4Q5T1C6 240 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 TMEM68Q96MH6 324 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 TAAR9Q96RI9 348 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 RNF167Q9H6Y7 350 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 CGGBP1Q9UFW8 167 aaPredicted RBP14.02□□□□□ -0.17
TIMP3-201ENST00000266085 TRAPPC2LQ9UL33 140 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 PCDHB10Q9UN67 800 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 LOC107986453A0A1B0GWG9 222 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 SPINT1O43278 529 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 SSX5O60225 188 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 TCRBP04435 133 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 SIAH3Q8IW03 269 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 ZG16BQ96DA0 208 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 RAB39BQ96DA2 213 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 SLAMF6Q96DU3 332 aa14.02□□□□□ -0.17
TIMP3-201ENST00000266085 C11orf54Q9H0W9 315 aaPredicted RBP14.02□□□□□ -0.17
TIMP3-201ENST00000266085 METTL17Q9H7H0 456 aaPredicted RBP14.02□□□□□ -0.17
TIMP3-201ENST00000266085 PRSS37A4D1T9 235 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 CHRM2P08172 466 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 CORO6Q6QEF8 472 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 GLIPR1L1Q6UWM5 242 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 OVCH1Q7RTY7 1134 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF546Q86UE3 836 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF679Q8IYX0 411 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 ISYNA1Q9NPH2 558 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 CLEC1BQ9P126 229 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 A4GNTQ9UNA3 340 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 TRABD2BA6NFA1 517 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 EML2O95834 649 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms