RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 EMC9Q9Y3B6 208 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 PRR14LQ5THK1 2151 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 A0A087WXM4 84 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 A0A0G2JNJ9 132 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 A0A1W2PQL4 384 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 WNT11O96014 354 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 CGAP01215 116 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 PTHP01270 115 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 HOXD4P09016 255 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 SPARCP09486 303 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 LIMS3P0CW19 117 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 LIMS4P0CW20 117 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 B4GALT1P15291 398 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 DCKP27707 260 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 CEACAM8P31997 349 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 TIMP3P35625 211 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF133P52736 654 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ADAM8P78325 824 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ARF1P84077 181 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 EMX1Q04741 257 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 TMED1Q13445 227 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 NEDD8Q15843 81 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 OR2G6Q5TZ20 316 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 OR2A2Q6IF42 318 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 TFAP2EQ6VUC0 442 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 KCTD8Q6ZWB6 473 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 SPATC1Q76KD6 591 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 SLC16A9Q7RTY1 509 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 PRSS48Q7RTY5 328 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 CDC20BQ86Y33 519 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF610Q8N9Z0 462 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 NABP1Q96AH0 204 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 AMELYQ99218 206 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 SH3GL3Q99963 347 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF649Q9BS31 505 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 LINC00470Q9BZP3 86 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 MARCH7Q9H992 704 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 B3GAT2Q9NPZ5 323 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ERVK13-1Q9NX77 482 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 Q9UFV3 132 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 KCNG2Q9UJ96 466 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 RALYQ9UKM9 306 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 DIDO1Q9BTC0 2240 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 A0A096LPE4 126 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 A0A1W2PPZ6 126 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 DAPL1A0PJW8 107 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF587BE7ETH6 402 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 IGHA1P01876 353 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 LCKP06239 509 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 PATE4P0C8F1 98 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF823P16415 610 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 PCMT1P22061 227 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ENTPD1P49961 510 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF84P51523 738 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF85Q03923 595 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 POU4F2Q12837 409 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 IRF3Q14653 427 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 TSC22D1Q15714 1073 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 EIF2S3LQ2VIR3 472 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 FBXW9Q5XUX1 488 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 XAF1Q6GPH4 301 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 KLHL24Q6TFL4 600 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ATCAYQ86WG3 371 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 LIX1LQ8IVB5 337 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ACBD7Q8N6N7 88 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 POMGNT2Q8NAT1 580 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 OR10H5Q8NGA6 315 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 OR6K3Q8NGY3 331 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 FNDC8Q8TC99 324 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 OR5M11Q96RB7 305 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF416Q9BWM5 594 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 CDCA4Q9BXL8 241 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 ISG20L2Q9H9L3 353 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 CCNB1IP1Q9NPC3 277 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 POLE4Q9NR33 117 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 PLSCR4Q9NRQ2 329 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 SNX5Q9Y5X3 404 aa8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 KMT2BQ9UMN6 2715 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-201ENST00000263694 TRIM64CA6NLI5 447 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 INMTO95050 263 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 TFAP2AP05549 437 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 ITGA5P08648 1049 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 NR2C1P13056 603 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 BMP5P22003 454 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 CTSSP25774 331 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 CA7P43166 264 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 UQCRFS1P47985 274 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 OR12D2P58182 307 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 TLE1Q04724 770 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 EIF2B1Q14232 305 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 ENDOGQ14249 297 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 TP53I3Q53FA7 332 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 SOWAHCQ53LP3 525 aaPredicted RBP8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 RIPPLY2Q5TAB7 128 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF813Q6ZN06 617 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 PLEKHG7Q6ZR37 379 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 SKA3Q8IX90 412 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 NANOGP1Q8N7R0 232 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 FGFBP3Q8TAT2 258 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 THEM6Q8WUY1 208 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms