RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CRYGSP22914 178 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 MPGP29372 298 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 RPL18Q07020 188 aaKnown RBP14.74□□□□□ -0.05
SDCBP-201ENST00000260130 LGALS3BPQ08380 585 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 AMBNQ9NP70 447 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 PEX16Q9Y5Y5 336 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 APCP25054 2843 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 TACC2O95359 2948 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 TRBV4-1A0A0J9YWV2 114 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF726A6NNF4 738 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 MPZL2O60487 215 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 RAD51DO75771 328 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 GOSR1O95249 250 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 GABRB1P18505 474 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 AQP2P41181 271 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 CDC42P60953 191 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 TGFBR3Q03167 851 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 ST3GAL4Q11206 333 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 ARMCX4Q5H9R4 360 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 C9orf135Q5VTT2 229 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 OR7E24Q6IFN5 339 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 TMPRSS11FQ6ZWK6 438 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 SLC35D2Q76EJ3 337 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF367Q7RTV3 350 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 TMEM200AQ86VY9 491 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 MEX3DQ86XN8 651 aaKnown RBP14.73□□□□□ -0.05
SDCBP-201ENST00000260130 TMEM123Q8N131 208 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 FUZQ9BT04 418 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 LOC100506127A0A0U1RQW1 187 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 EFCAB10A6NFE3 127 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF587BE7ETH6 402 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 TBX1O43435 398 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 PTTG1O95997 202 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 F13BP05160 661 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 NUDT6P53370 316 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 IRF3Q14653 427 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 SEC23BQ15437 767 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 TAB1Q15750 504 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 STK11Q15831 433 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 TIMM50Q3ZCQ8 353 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 POC5Q8NA72 575 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 MOSPD2Q8NHP6 518 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 ALKBH3Q96Q83 286 aaPredicted RBP14.73□□□□□ -0.05
SDCBP-201ENST00000260130 NIPSNAP1Q9BPW8 284 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 TMEM5Q9Y2B1 443 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 HIF3AQ9Y2N7 669 aa14.73□□□□□ -0.05
SDCBP-201ENST00000260130 ABCA12Q86UK0 2595 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 PNMA8CA0A1B0GUJ8 204 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 SOX6P35712 828 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 RGS6P49758 472 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 BIDP55957 195 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 KRTAP10-9P60411 292 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.72□□□□□ -0.05
SDCBP-201ENST00000260130 GABRA6Q16445 453 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 TIMM23BQ5SRD1 257 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 CARD17Q5XLA6 110 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 STEAP3Q658P3 488 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 LINGO2Q7L985 606 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 OAFQ86UD1 273 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 WFDC8Q8IUA0 241 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 GPR137CQ8N3F9 429 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 OR4K5Q8NGD3 323 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 LRR1Q96L50 414 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 ADAD1Q96M93 576 aaKnown RBP14.72□□□□□ -0.05
SDCBP-201ENST00000260130 CDADC1Q9BWV3 514 aa14.72□□□□□ -0.05
SDCBP-201ENST00000260130 CNOT2Q9NZN8 540 aaKnown RBP14.72□□□□□ -0.05
SDCBP-201ENST00000260130 A0A1W2PRG6 482 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 ARRDC5A6NEK1 342 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 OR5H1A6NKK0 313 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 CCNB2O95067 398 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 PTHP01270 115 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 GPR4P46093 362 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 SLC9A3P48764 834 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 HMGA2P52926 109 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 RPS4XP62701 263 aaKnown RBP14.71□□□□□ -0.05
SDCBP-201ENST00000260130 CAMK2DQ13557 499 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 ALKBH2Q6NS38 261 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 WDFY1Q8IWB7 410 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 C20orf196Q8IYI0 205 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 C1orf162Q8NEQ5 155 aaPredicted RBP14.71□□□□□ -0.05
SDCBP-201ENST00000260130 OR51A7Q8NH64 312 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 OR6X1Q8NH79 312 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 TNFRSF13CQ96RJ3 184 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 POLDIP3Q9BY77 421 aaKnown RBP14.71□□□□□ -0.05
SDCBP-201ENST00000260130 CLEC4MQ9H2X3 399 aaPredicted RBP14.71□□□□□ -0.05
SDCBP-201ENST00000260130 TMEM165Q9HC07 324 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 KRCC1Q9NPI7 259 aaPredicted RBP14.71□□□□□ -0.05
SDCBP-201ENST00000260130 NOTCH2Q04721 2471 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 DEFB108AA8MXU0 73 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 RPL36A-HNRNPH2H7BZ11 118 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 CDC42EP2O14613 210 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 HRGP04196 525 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 OMPP47874 163 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 ALG10Q5BKT4 473 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 HTRA1Q92743 480 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 MUCL1Q96DR8 90 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 FAM46AQ96IP4 442 aaKnown RBP14.71□□□□□ -0.05
SDCBP-201ENST00000260130 CDCA4Q9BXL8 241 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 OR51E2Q9H255 320 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 CLN6Q9NWW5 311 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms