RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HMGCLL1Q8TB92 370 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF564Q8TBZ8 553 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM169Q96HH4 297 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 LOXL4Q96JB6 756 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 IP6K3Q96PC2 410 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 TMUB1Q9BVT8 246 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 ALG9Q9H6U8 611 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 OBP2BQ9NPH6 170 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 SEMA4GQ9NTN9 838 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 TMEM38BQ9NVV0 291 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 SLC23A2Q9UGH3 650 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 CACFD1Q9UGQ2 172 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 ASF1AQ9Y294 204 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 FAM230AA0A1W2PPH8 454 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF814B7Z6K7 855 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 FAAHO00519 579 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 OR2A4O95047 310 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 RAP2AP10114 183 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 NCK1P16333 377 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 AMD1P17707 334 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 IDSP22304 550 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 CLDN12P56749 244 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 EXT1Q16394 746 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 MAPK14Q16539 360 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 IL34Q6ZMJ4 242 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 ESPNLQ6ZVH7 1005 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 IGDCC3Q8IVU1 814 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 STPG4Q8N801 248 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 OR10X1Q8NGY0 326 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 GGHQ92820 318 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 OR2A7Q96R45 310 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 TPSD1Q9BZJ3 242 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 XYLT2Q9H1B5 865 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF160Q9HCG1 818 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 MMP26Q9NRE1 261 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 GPATCH2LQ9NWQ4 482 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 RPS6KB2Q9UBS0 482 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 COPS7AQ9UBW8 275 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 UBIAD1Q9Y5Z9 338 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 ANKRD12Q6UB98 2062 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 ZSWIM8A7E2V4 1837 aa7.03□□□□□ -1.28
GPNMB-201ENST00000258733 SCN7AQ01118 1682 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 C17orf102A2RUQ5 167 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 RNF212BA8MTL3 300 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 CXorf49A8MYA2 514 aaPredicted RBP7.02□□□□□ -1.28
GPNMB-201ENST00000258733 G3V3Y1 287 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 G3V4G9 280 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 OR2F2O95006 317 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 BMP5P22003 454 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 AGTR2P50052 363 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 SULT1A1P50225 295 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 SNRPD1P62314 119 aaKnown RBP7.02□□□□□ -1.28
GPNMB-201ENST00000258733 SMAGPQ0VAQ4 97 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 PJVKQ0ZLH3 352 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 TCTEX1D4Q5JR98 221 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 TIFABQ6ZNK6 161 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 SIRT6Q8N6T7 355 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 SAMD12Q8N8I0 201 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 OR4K5Q8NGD3 323 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 OR52L2PQ8NGH6 319 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 EEF1AKMT1Q8WVE0 214 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 FAM3CQ92520 227 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 DNASE1L2Q92874 299 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 FAM162AQ96A26 154 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 PNPLA2Q96AD5 504 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 PCYT2Q99447 389 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 GPR20Q99678 358 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 MGLLQ99685 303 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 SYT4Q9H2B2 425 aa7.02□□□□□ -1.28
GPNMB-201ENST00000258733 C14orf166Q9Y224 244 aaKnown RBP7.02□□□□□ -1.28
GPNMB-201ENST00000258733 IDSB3KWA1 339 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF593O00488 134 aaPredicted RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 RBFOX2O43251 390 aaKnown RBP eCLIP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 KLK8O60259 260 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 TSPAN15O95858 294 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 C1QAP02745 245 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 SLC6A6P31641 620 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 POLR2HP52434 150 aaKnown RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 RAB38P57729 211 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 RHOGP84095 191 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 B4GALNT1Q00973 533 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 FABP5Q01469 135 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM132DQ14C87 1099 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 MORN2Q502X0 79 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 UBALD2Q8IYN6 164 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 OR6V1Q8N148 313 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 GTPBP8Q8N3Z3 284 aaPredicted RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 NHLRC2Q8NBF2 726 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 OR56B4Q8NH76 319 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 C1orf216Q8TAB5 229 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ZBTB8AQ96BR9 441 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 CD180Q99467 661 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 GPR22Q99680 433 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 PDCD2LQ9BRP1 358 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 TIMM29Q9BSF4 260 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 CFHR5Q9BXR6 569 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 RTN4RQ9BZR6 473 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 AKTIPQ9H8T0 292 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 OSER1Q9NX31 292 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 PSORS1C1Q9UIG5 152 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms