RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 RIDAP52758 137 aaKnown RBP17.11■□□□□ 0.33
YBX3-201ENST00000228251 DNM1P46Q6ZS02 220 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 PRSS45Q7RTY3 260 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 DNAAF1Q8NEP3 725 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 RAB40AQ8WXH6 277 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 PPP1R14AQ96A00 147 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 HAVCR1Q96D42 359 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 ZFP3Q96NJ6 502 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 C7orf50Q9BRJ6 194 aaKnown RBP17.11■□□□□ 0.33
YBX3-201ENST00000228251 GTPBP2Q9BX10 602 aaKnown RBP17.11■□□□□ 0.33
YBX3-201ENST00000228251 AUNIPQ9H7T9 357 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 PROK2Q9HC23 129 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 KLHL9Q9P2J3 617 aa17.11■□□□□ 0.33
YBX3-201ENST00000228251 RBMX2Q9Y388 322 aaKnown RBP17.11■□□□□ 0.33
YBX3-201ENST00000228251 B4E171 279 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 SULT1B1O43704 296 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 TRAF3IP2O43734 574 aaPredicted RBP17.1■□□□□ 0.33
YBX3-201ENST00000228251 KHDRBS3O75525 346 aaKnown RBP17.1■□□□□ 0.33
YBX3-201ENST00000228251 TSPAN7P41732 249 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 RPS15P62841 145 aaKnown RBP17.1■□□□□ 0.33
YBX3-201ENST00000228251 DYRK1AQ13627 763 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 OR7E24Q6IFN5 339 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 FAM166AQ6J272 317 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 KRT77Q7Z794 578 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.1■□□□□ 0.33
YBX3-201ENST00000228251 IZUMO1Q8IYV9 350 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 UBASH3BQ8TF42 649 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 RANGRFQ9HD47 186 aaPredicted RBP17.1■□□□□ 0.33
YBX3-201ENST00000228251 MRPS7Q9Y2R9 242 aaKnown RBP17.1■□□□□ 0.33
YBX3-201ENST00000228251 C7orf66A4D0T2 115 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 ZNF814B7Z6K7 855 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 C9J4A7 227 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 TP53I11O14683 189 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 TPPPO94811 219 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 ZNF883P0CG24 379 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 DEGS2Q6QHC5 323 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 NCCRP1Q6ZVX7 275 aaPredicted RBP17.1■□□□□ 0.33
YBX3-201ENST00000228251 TCTE3Q8IZS6 198 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 TOMM5Q8N4H5 51 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 OR11G2Q8NGC1 345 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 C5orf34Q96MH7 638 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 FYTTD1Q96QD9 318 aaKnown RBP17.1■□□□□ 0.33
YBX3-201ENST00000228251 OR2B2Q9GZK3 357 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 SMOC1Q9H4F8 434 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 G6PC2Q9NQR9 355 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 R4GMQ9 66 aa17.1■□□□□ 0.33
YBX3-201ENST00000228251 KIAA1549Q9HCM3 1950 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 H0YC42 278 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 EIF1P41567 113 aaKnown RBP17.09■□□□□ 0.33
YBX3-201ENST00000228251 BIDP55957 195 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 ODF4Q2M2E3 257 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 ZFP69Q49AA0 526 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 TIGD3Q6B0B8 471 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 OPN5Q6U736 354 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 KRT74Q7RTS7 529 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 TMPRSS12Q86WS5 348 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 DTWD2Q8NBA8 298 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 ZBTB44Q8NCP5 570 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 OR5M1Q8NGP8 315 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 SYNPRQ8TBG9 265 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 SLC25A43Q8WUT9 341 aaPredicted RBP17.09■□□□□ 0.33
YBX3-201ENST00000228251 ASB5Q8WWX0 329 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 CMKLR1Q99788 373 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 ANGPTL4Q9BY76 406 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 ZNF275Q9NSD4 429 aaPredicted RBP17.09■□□□□ 0.33
YBX3-201ENST00000228251 FBXL3Q9UKT7 428 aa17.09■□□□□ 0.33
YBX3-201ENST00000228251 LOC102725191A0A1B0GVB3 256 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 GABARAPH6UMI1 98 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 ISG15P05161 165 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 PGA4P0DJD7 388 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 PGA3P0DJD8 388 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 IGFBP3P17936 291 aaPredicted RBP17.08■□□□□ 0.33
YBX3-201ENST00000228251 FSTP19883 344 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 DCXRQ7Z4W1 244 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 PLCZ1Q86YW0 608 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 RNF133Q8WVZ7 376 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 ZBTB8AQ96BR9 441 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 SCMH1Q96GD3 660 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 EMC6Q9BV81 110 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 SLC39A1Q9NY26 324 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 STEAP1Q9UHE8 339 aa17.08■□□□□ 0.33
YBX3-201ENST00000228251 PCSK5Q92824 1860 aa17.08■□□□□ 0.32
YBX3-201ENST00000228251 A0A087WZY1 265 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 ANXA2P2A6NMY6 339 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 LDOC1O95751 146 aaPredicted RBP17.07■□□□□ 0.32
YBX3-201ENST00000228251 MAS1P04201 325 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 ANXA2P07355 339 aaKnown RBP17.07■□□□□ 0.32
YBX3-201ENST00000228251 ZNF823P16415 610 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 FKBP2P26885 142 aaKnown RBP17.07■□□□□ 0.32
YBX3-201ENST00000228251 GDNFP39905 211 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 ART1P52961 327 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 GPR85P60893 370 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 RRAS2P62070 204 aaPredicted RBP17.07■□□□□ 0.32
YBX3-201ENST00000228251 PLA2G7Q13093 441 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 RNASE12Q5GAN4 147 aaKnown RBP17.07■□□□□ 0.32
YBX3-201ENST00000228251 PRAMEF20Q5VT98 475 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 LIX1LQ8IVB5 337 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 GLB1L2Q8IW92 636 aa17.07■□□□□ 0.32
YBX3-201ENST00000228251 GTPBP8Q8N3Z3 284 aaPredicted RBP17.07■□□□□ 0.32
YBX3-201ENST00000228251 OR4K17Q8NGC6 315 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms