RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 ZNF519Q8TB69 540 aa16.34■□□□□ 0.21
TRAPPC6A-201ENST00000006275 SEC61A2Q9H9S3 476 aa16.34■□□□□ 0.21
TRAPPC6A-201ENST00000006275 GRHPRQ9UBQ7 328 aa16.34■□□□□ 0.21
TRAPPC6A-201ENST00000006275 ADAM18Q9Y3Q7 739 aa16.34■□□□□ 0.21
TRAPPC6A-201ENST00000006275 MEGF8Q7Z7M0 2845 aa16.34■□□□□ 0.21
TRAPPC6A-201ENST00000006275 LOC390937A0A1W2PQ73 354 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 TNFRSF11BO00300 401 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 KCNAB3O43448 404 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 DNAJC8O75937 253 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SLC2A10O95528 541 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 RAB36O95755 333 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 PTDSS1P48651 473 aaKnown RBP16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 RAB1AP62820 205 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 FMODQ06828 376 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 THEM4Q5T1C6 240 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 C10orf128Q5T292 105 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 PGM2L1Q6PCE3 622 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 MYPOPQ86VE0 399 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 FNDC8Q8TC99 324 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 NSMAFQ92636 917 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 NMD3Q96D46 503 aaKnown RBP16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 Q96M85 177 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 GPA33Q99795 319 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SH3GL3Q99963 347 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SOX7Q9BT81 388 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 DENND2DQ9H6A0 471 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SMURF2Q9HAU4 748 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 NOX3Q9HBY0 568 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 MYOZ1Q9NP98 299 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 ZNF224Q9NZL3 707 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 LYVE1Q9Y5Y7 322 aa16.33■□□□□ 0.2
TRAPPC6A-201ENST00000006275 IGKV1D-43A0A0B4J1Z2 117 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 XKRYO14609 159 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 DYSFO75923 2080 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 PATE4P0C8F1 98 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 CALCRP30988 508 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 GIPRP48546 466 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 HMGA2P52926 109 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SNRPD2P62316 118 aaKnown RBP16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 NRN1LQ496H8 165 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SLC25A47Q6Q0C1 308 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 THSD4Q6ZMP0 1018 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SLC16A14Q7RTX9 510 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 CLDN22Q8N7P3 220 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 ZNF540Q8NDQ6 660 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 IL17RDQ8NFM7 739 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 GNPDA2Q8TDQ7 276 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 ZNF570Q96NI8 536 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 GPX7Q96SL4 187 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 BPESC1Q9GZL8 116 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 RNF121Q9H920 327 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 IL20RAQ9UHF4 553 aa16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 TMEFF2Q9UIK5 374 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC6A-201ENST00000006275 AQP12BA6NM10 295 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 H7C1C5 153 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 RAP2AP10114 183 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 FPR3P25089 353 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 RASSF2P50749 326 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 FXYD6P3P58550 94 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 LCN6P62502 163 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SWI5Q1ZZU3 235 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 MST1LQ2TV78 715 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 GPR139Q6DWJ6 353 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 C1orf94Q6P1W5 598 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SMARCD3Q6STE5 483 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 FAM122BQ7Z309 247 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 DPPA2Q7Z7J5 298 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 AQP12AQ8IXF9 295 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 LINC00471Q8N535 108 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 OR4F15Q8NGB8 312 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 FGFBP3Q8TAT2 258 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 FANK1Q8TC84 345 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 ZMYND19Q96E35 227 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 ZNF75AQ96N20 296 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 VRK1Q99986 396 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 KCNN2Q9H2S1 579 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 NRIP3Q9NQ35 241 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 IER3IP1Q9Y5U9 82 aa16.31■□□□□ 0.2
TRAPPC6A-201ENST00000006275 IGHV2OR16-5A0A0B4J2B6 119 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 TEX13CA0A0J9YWL9 993 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 LRP5LA4QPB2 252 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 GSC2O15499 205 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 MGRN1O60291 552 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 ATP5HO75947 161 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 ZNF14P17017 642 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 EGR1P18146 543 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 NPR2P20594 1047 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SDHAP31040 664 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 CDAP32320 146 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 GUCA1AP43080 201 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 RPS6KA3P51812 740 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 MRPS34P82930 218 aaKnown RBP16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 KRR1Q13601 381 aaKnown RBP16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 FLOT2Q14254 428 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 RAB39AQ14964 217 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SGCAQ16586 387 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 SLC36A2Q495M3 483 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 MESTQ5EB52 335 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 OR2T5Q6IEZ7 315 aa16.3■□□□□ 0.2
TRAPPC6A-201ENST00000006275 TMEM53Q6P2H8 277 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms