RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Otop1Q80VM9 600 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Cpt1cQ8BGD5 798 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Tns4Q8BZ33 696 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Stoml2Q99JB2 353 aaKnown RBP16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Slc35a4Q9D321 324 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Pfn4Q9D6I3 129 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Keg1Q9DCY0 295 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Jmjd6Q9ERI5 403 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Usp18Q9WTV6 368 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 MthfrQ9WU20 654 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Slco5a1E9PVD9 850 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gm8857L7N291 182 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Ifi204P0DOV2 619 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 ArsgQ3TYD4 525 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Ranbp3lQ6PDH4 491 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Olfr1463Q7TQR3 310 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Fam98bQ80VD1 429 aaKnown RBP16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gpr137Q80ZU9 396 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Dusp28Q8BTR5 163 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Olfr970Q8VFN3 311 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Olfr583Q8VG25 319 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 NmbQ9CR53 121 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Lingo1Q9D1T0 614 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Il17bQ9QXT6 180 aa16.67■□□□□ 0.26
Trim47-202ENSMUST00000106441 Zfp873A0A1B0GT64 667 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gm14418A2ARR6 358 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gm14322A2AW66 358 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gm14085A2AWR5 660 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Slc16a5G5E8K6 468 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 9330182O14RikJ3QNB2 140 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 PvalbP32848 110 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 FahP35505 419 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 CapzbP47757 277 aaKnown RBP16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Ppp1caP62137 330 aaKnown RBP16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Lemd1Q14C37 129 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 2900092C05RikQ5I0V9 184 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Olfr332Q5NC45 344 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Traf4Q61382 470 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Abhd16bQ80YU0 474 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Adam30Q811Q3 732 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Edem2Q8BJT9 577 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Prps1l1Q8C5R8 318 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Serinc2Q8K0E7 450 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Ctxn1Q8K129 82 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Saysd1Q8K190 188 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Vmn1r228Q8R2A7 333 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Asb15Q8VHS6 583 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Scamp2Q9ERN0 329 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Bin3Q9JI08 253 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 PpieQ9QZH3 301 aaKnown RBP16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Nup214Q80U93 2085 aa16.66■□□□□ 0.26
Trim47-202ENSMUST00000106441 Olfr1223A0A1L1SU13 311 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Vmn2r76E9Q3F5 853 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Olfr1348F6VB59 318 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gm11168J3QN50 228 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Tgfbr3O88393 850 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 GcatO88986 416 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Cd48P18181 240 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Wnt11P48615 354 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 ArsbP50429 534 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Uck1P52623 277 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Tspan5P62080 268 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 HfeP70387 359 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Slc35f3Q1LZI2 421 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Znf629Q6A085 867 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Carns1Q6ZPS2 827 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Rspo4Q8BJ73 228 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gm9999Q8C5Y2 53 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Olfr1484Q8VEU6 315 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Slc25a36Q922G0 311 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Hrasls5Q9CPX5 270 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Ier3ip1Q9CR20 82 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Rnf128Q9D304 428 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 NosipQ9D6T0 301 aaKnown RBP16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Lypd2Q9DD23 127 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gm45736A0A1B0GS18 427 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gm5788A0A1Y7VK80 144 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 H2-EaP01904 255 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 P04224 255 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Gstm2P15626 218 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 PpiaP17742 164 aaKnown RBP16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Pax2P32114 414 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Arf3P61205 181 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Prss38Q3UKY7 322 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Zp3rQ60736 579 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 AstlQ6HA09 435 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Zar1Q80SU3 361 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Scml4Q80VG1 408 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Fam199xQ8K2D0 388 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 RfesdQ8K2P6 157 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Ucn3Q924A4 164 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Q9CRW3 126 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Q9D8N1 392 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Olfr27Q9EQ90 311 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 SrfQ9JM73 504 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Dbf4Q9QZ41 663 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 Dok3Q9QZK7 444 aa16.65■□□□□ 0.26
Trim47-202ENSMUST00000106441 MgaA2AWL7 3003 aaKnown RBP16.64■□□□□ 0.25
Trim47-202ENSMUST00000106441 Gm13102A2ASJ3 519 aa16.64■□□□□ 0.25
Trim47-202ENSMUST00000106441 Skint10A7TZG1 354 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms