RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Cx3cr1Q9Z0D9 354 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Bpnt1Q9Z0S1 308 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 NesQ6P5H2 1864 aaKnown RBP13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm6569D3YTM9 175 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Tspan6O70401 245 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Amy1P00687 511 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Itgb2P11835 771 aaKnown RBP13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Rab22aP35285 194 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 MlipQ5FW52 269 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cln3Q61124 438 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Ifna15Q61718 190 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 MaoaQ64133 526 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cxcl3Q6W5C0 100 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Vmn1r75Q8R289 305 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Hrasls5Q9CPX5 270 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Nme7Q9QXL8 395 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Zfp53Q9Z117 652 aa13.58□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Zfp109A0A0U1RPC5 652 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm17669F6QL70 154 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 9130204L05RikG3UWB8 92 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 MagP20917 626 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Tpt1P63028 172 aaKnown RBP13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Arntl2Q2VPD4 579 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mettl7a1Q8C6B0 244 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Pex12Q8VC48 359 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr672Q8VG28 312 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 B3gnt9Q8VI16 399 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Dus3lQ91XI1 637 aaKnown RBP13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cwh43Q91YL7 699 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Fcrl6A1YIY0 268 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Hoxb9P20615 250 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mtf1Q07243 675 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Ces2fQ08ED5 561 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 ApoolQ78IK4 265 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Sertm1Q8CD78 107 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr1254Q8VFB1 314 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Lypd3Q91YK8 363 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Pcbd2Q9CZL5 136 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 MokQ9WVS4 420 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr485A0A140LJF5 317 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 LplP11152 474 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Ier2P17950 221 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr1222Q7TR02 311 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr128Q7TRJ1 308 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Prr11Q8BHE0 368 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 JkampQ8BI36 311 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Timd2Q8R183 305 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Swsap1Q8VCI7 278 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mitd1Q8VDV8 249 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr1151Q8VFQ8 308 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Taf9Q8VI33 264 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Plpp7Q91WB2 271 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Scgb3a2Q920H1 91 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mfsd4b2Q9D8I5 366 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Vmn2r58K7N6V2 862 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mtco2P00405 227 aaKnown RBP13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Epha5Q60629 876 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cramp1Q6PG95 1285 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Dtx3Q80V91 347 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Bdh1Q80XN0 343 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr1110Q8VG38 312 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Sntb1Q99L88 537 aaKnown RBP13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Nudt21Q9CQF3 227 aaKnown RBP13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mageh1Q9NWG9 218 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 CN725425A0A087WRU1 652 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Macc1E9PXX8 851 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Ms4a7E9Q9V5 267 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Zfp619G3X9T2 1161 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cd160O88875 185 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 P01669 111 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Il5P04401 133 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Bpifa2P07743 235 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Srp9P49962 86 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 RanP62827 216 aaKnown RBP13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Six5P70178 719 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 DhpsQ3TXU5 369 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Itpripl2Q3UV16 535 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Patz1Q5NBY9 687 aaKnown RBP13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Olfr1509Q7TQQ0 308 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Lkaaear1Q8BIG2 198 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Mrm1Q99J25 320 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 4933400A11RikQ9CR52 288 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Lgi1Q9JIA1 557 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Prss1Q9Z1R9 246 aa13.57□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Arl16B1ATY8 173 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Emp3O35912 163 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Wnt6P22727 364 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Crmp1P97427 572 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Doxl2Q6IMK7 723 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Impad1Q80V26 356 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Chst8Q8BQ86 417 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Fbxw17Q8CFE8 466 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Acaa1bQ8VCH0 424 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Acaa1aQ921H8 424 aaKnown RBP13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Cnih4Q9CX13 139 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 TrehQ9JLT2 576 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Gm11236J3QMS7 360 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 EdaO54693 391 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Prkar2aP12367 401 aa13.56□□□□□ -0.24
Pcdha1-201ENSMUST00000070797 Ackr3P56485 362 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms