RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Irf2bplQ8K3X4 775 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r220Q8R272 298 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr969Q8VG89 311 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr272Q8VGA0 319 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Trappc2Q9CQP2 140 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Bbs10Q9DBI2 713 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Elp4Q9ER73 422 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Kcnip1Q9JJ57 227 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Foxo1Q9R1E0 652 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm17087V9GXQ2 156 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Spag17Q5S003 2320 aa9.49□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tcrg-C4A0A075B6C7 190 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm4858A0A0A6YWS7 318 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Btbd35f21A0A140T8Q5 498 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn2r76E9Q3F5 853 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm20683H3BKJ1 410 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Btbd35f22J3QN64 498 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 BC117090L7N257 96 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 MagP20917 626 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sstr4P49660 385 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fabp2P55050 132 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Klhl8P59280 629 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fgf17P63075 216 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Dgcr2P98154 548 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm525Q3V3I5 90 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gpr119Q7TQP3 335 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 FevQ8QZW2 237 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sla2Q8R4L0 259 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr434Q8VF17 321 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr47Q8VF18 321 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Letmd1Q924L1 360 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 2210010C04RikQ9CPN9 247 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Plxdc2Q9DC11 530 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cd302Q9DCG2 228 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fezf2Q9ESP5 455 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gstz1Q9WVL0 216 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Trav15d-1-dv6d-1A0A075B624 124 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 A0A286YDG0 184 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Skint8A7XV07 398 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm10376D3YXI8 184 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm4181E9Q7X3 184 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zfp141G3UY09 685 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm10375L7N286 184 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 1700066B19RikQ3TS39 127 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc30a10Q3UVU3 470 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr728Q7TRM6 311 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pttg1ipQ8R143 174 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr815Q8VFU0 316 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Q99K99 313 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Lingo1Q9D1T0 614 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 1700001F09RikQ9DAR5 184 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Wif1Q9WUA1 379 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm5458L7N219 204 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ube2nP61089 152 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Thbs2Q03350 1172 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Hoxc4Q08624 264 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Lin28bQ45KJ6 247 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Jagn1Q5XKN4 183 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zer1Q80ZJ6 779 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Dcun1d4Q8CCA0 292 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r32Q8R2D9 302 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ntng1Q8R4G0 539 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr648Q8VG19 316 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr713Q920G5 324 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cdca5Q9CPY3 264 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cyc1Q9D0M3 325 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Mcts1Q9DB27 181 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sorcs2Q9EPR5 1159 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Jmjd6Q9ERI5 403 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Btnl10Q9JK39 275 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 DptQ9QZZ6 201 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Igkv10-94A0A075B5L1 115 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm1330D3Z460 184 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 NnmtO55239 264 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cav3P51637 151 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ext1P97464 746 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Lemd1Q14C37 129 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 ShhQ62226 437 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ranbp3lQ6PDH4 491 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fbll1Q80WS3 314 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tmem184bQ8BG09 407 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ablim2Q8BL65 612 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Nyap2Q8BM65 682 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gprin3Q8BWS5 763 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 PigtQ8BXQ2 582 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Hbq1aQ8BYM1 145 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gfm1Q8K0D5 751 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Lypd3Q91YK8 363 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Dusp7Q91Z46 422 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc25a37Q920G8 338 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 ClpsQ9CQC2 113 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 PsenenQ9CQR7 101 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Eif1bQ9CXU9 113 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Qrsl1Q9CZN8 525 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fam96bQ9D187 163 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r48Q9EQ52 302 aa9.48□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Trabd2bB1ATG9 517 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm45711E0CXA2 391 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm21411J3KMS0 136 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Prdx6O08709 224 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms