RNA–Protein interactions for RNA: snR80

snR80, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR80, Length 171 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR80	snR80	ERT1	P38140	529 aa		2.77	□□□□□ -1.97
snR80	snR80	SFB3	P38810	929 aa		2.77	□□□□□ -1.97
snR80	snR80	YBP2	P53169	641 aa		2.77	□□□□□ -1.97
snR80	snR80	STP1	Q00947	519 aa		2.77	□□□□□ -1.97
snR80	snR80	NEW1	Q08972	1196 aa	Known RBP	2.77	□□□□□ -1.97
snR80	snR80	THI21	Q08975	551 aa		2.77	□□□□□ -1.97
snR80	snR80	MLH3	Q12083	715 aa		2.77	□□□□□ -1.97
snR80	snR80	TOP3	P13099	656 aa		2.76	□□□□□ -1.97
snR80	snR80	SAT4	P25333	603 aa	Known RBP	2.76	□□□□□ -1.97
snR80	snR80	FUB1	P25659	250 aa		2.76	□□□□□ -1.97
snR80	snR80	MVD1	P32377	396 aa	Known RBP	2.76	□□□□□ -1.97
snR80	snR80	UGP1	P32861	499 aa	Known RBP	2.76	□□□□□ -1.97
snR80	snR80	PHO11	P35842	467 aa		2.76	□□□□□ -1.97
snR80	snR80	PHO12	P38693	467 aa		2.76	□□□□□ -1.97
snR80	snR80	NUP60	P39705	539 aa		2.76	□□□□□ -1.97
snR80	snR80	PSA1	P41940	361 aa	Known RBP	2.76	□□□□□ -1.97
snR80	snR80	IRC8	P47046	822 aa		2.76	□□□□□ -1.97
snR80	snR80	MTR3	P48240	250 aa	Predicted RBP	2.76	□□□□□ -1.97
snR80	snR80	OPI10	Q08202	246 aa		2.76	□□□□□ -1.97
snR80	snR80	ENV7	Q12003	364 aa		2.76	□□□□□ -1.97
snR80	snR80	GPR1	Q12361	961 aa		2.76	□□□□□ -1.97
snR80	snR80	NOP1	P15646	327 aa	Known RBP	2.75	□□□□□ -1.97
snR80	snR80	HBS1	P32769	611 aa	Known RBP	2.75	□□□□□ -1.97
snR80	snR80	CCT5	P40413	562 aa	Known RBP	2.75	□□□□□ -1.97
snR80	snR80	DAL7	P21826	554 aa		2.74	□□□□□ -1.97
snR80	snR80	SAP190	P36123	1033 aa		2.74	□□□□□ -1.97
snR80	snR80	FMO1	P38866	432 aa		2.74	□□□□□ -1.97
snR80	snR80	CCT4	P39078	528 aa	Known RBP	2.74	□□□□□ -1.97
snR80	snR80	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
snR80	snR80	MBR1	P23493	339 aa		2.73	□□□□□ -1.97
snR80	snR80	EUG1	P32474	517 aa		2.73	□□□□□ -1.97
snR80	snR80	TRZ1	P36159	838 aa	Predicted RBP	2.73	□□□□□ -1.97
snR80	snR80	SET5	P38890	526 aa	Known RBP	2.73	□□□□□ -1.97
snR80	snR80	CWC24	P53769	259 aa		2.73	□□□□□ -1.97
snR80	snR80	YPR071W	Q12346	211 aa		2.73	□□□□□ -1.97
snR80	snR80	ZRT2	Q12436	422 aa		2.73	□□□□□ -1.97
snR80	snR80	ABF1	P14164	731 aa		2.72	□□□□□ -1.97
snR80	snR80	THR1	P17423	357 aa	Known RBP	2.72	□□□□□ -1.97
snR80	snR80	APL2	P36000	726 aa	Predicted RBP	2.72	□□□□□ -1.97
snR80	snR80	PET10	P36139	283 aa		2.72	□□□□□ -1.97
snR80	snR80	APT2	P36973	181 aa		2.72	□□□□□ -1.97
snR80	snR80	PRP31	P49704	494 aa	Predicted RBP	2.72	□□□□□ -1.97
snR80	snR80	MTL1	P53214	551 aa		2.72	□□□□□ -1.97
snR80	snR80	IRC3	Q06683	689 aa		2.72	□□□□□ -1.97
snR80	snR80	REH1	Q06709	432 aa		2.72	□□□□□ -1.97
snR80	snR80	BMS1	Q08965	1183 aa	Known RBP	2.72	□□□□□ -1.97
snR80	snR80	EMC3	P36039	253 aa		2.71	□□□□□ -1.98
snR80	snR80	YMC2	P38087	329 aa		2.71	□□□□□ -1.98
snR80	snR80	TAD1	P53065	400 aa		2.71	□□□□□ -1.98
snR80	snR80	ORM2	Q06144	216 aa		2.71	□□□□□ -1.98
snR80	snR80	EAF1	Q06337	982 aa		2.71	□□□□□ -1.98
snR80	snR80	SPC97	P38863	823 aa		2.7	□□□□□ -1.98
snR80	snR80	PMC1	P38929	1173 aa	Predicted RBP	2.7	□□□□□ -1.98
snR80	snR80	LYS9	P38999	446 aa		2.7	□□□□□ -1.98
snR80	snR80	TAX4	P47030	604 aa		2.7	□□□□□ -1.98
snR80	snR80	ZDS1	P50111	915 aa	Known RBP	2.7	□□□□□ -1.98
snR80	snR80	ZIP2	P53061	704 aa		2.7	□□□□□ -1.98
snR80	snR80	SPC98	P53540	846 aa		2.7	□□□□□ -1.98
snR80	snR80	HFD1	Q04458	532 aa		2.7	□□□□□ -1.98
snR80	snR80	MCM21	Q06675	368 aa		2.7	□□□□□ -1.98
snR80	snR80	PIN2	Q12057	282 aa		2.7	□□□□□ -1.98
snR80	snR80	ULA1	Q12059	462 aa		2.7	□□□□□ -1.98
snR80	snR80	USV1	Q12132	391 aa		2.7	□□□□□ -1.98
snR80	snR80	STE12	P13574	688 aa		2.69	□□□□□ -1.98
snR80	snR80	YMC1	P32331	307 aa		2.69	□□□□□ -1.98
snR80	snR80	HOT13	P36078	116 aa		2.69	□□□□□ -1.98
snR80	snR80	MAD1	P40957	749 aa		2.69	□□□□□ -1.98
snR80	snR80	LRS4	Q04087	347 aa	Known RBP	2.69	□□□□□ -1.98
snR80	snR80	YCL002C	P25565	263 aa		2.68	□□□□□ -1.98
snR80	snR80	YKL069W	P36088	180 aa		2.68	□□□□□ -1.98
snR80	snR80	YHR112C	P38716	378 aa		2.68	□□□□□ -1.98
snR80	snR80	CRP1	P38845	465 aa	Known RBP	2.68	□□□□□ -1.98
snR80	snR80	ATG36	P46983	293 aa		2.68	□□□□□ -1.98
snR80	snR80	UTP8	P53276	713 aa	Known RBP	2.68	□□□□□ -1.98
snR80	snR80	ARG5,6	Q01217	863 aa		2.68	□□□□□ -1.98
snR80	snR80	YOR111W	Q99210	232 aa		2.68	□□□□□ -1.98
snR80	snR80	SET3	P36124	751 aa		2.67	□□□□□ -1.98
snR80	snR80	YBR284W	P38150	797 aa		2.67	□□□□□ -1.98
snR80	snR80	SHR5	P41912	237 aa		2.67	□□□□□ -1.98
snR80	snR80	YGR151C	P53287	111 aa		2.67	□□□□□ -1.98
snR80	snR80	YDR514C	Q04408	483 aa		2.67	□□□□□ -1.98
snR80	snR80	YBR182C-A	Q8TGU6	64 aa		2.67	□□□□□ -1.98
snR80	snR80	PHO5	P00635	467 aa		2.66	□□□□□ -1.98
snR80	snR80	MSD1	P15179	658 aa	Known RBP	2.66	□□□□□ -1.98
snR80	snR80	ADE2	P21264	571 aa	Known RBP	2.66	□□□□□ -1.98
snR80	snR80	PXL1	P36166	706 aa		2.66	□□□□□ -1.98
snR80	snR80	RLP7	P40693	322 aa	Known RBP	2.66	□□□□□ -1.98
snR80	snR80	ALR2	P43553	858 aa		2.66	□□□□□ -1.98
snR80	snR80	PFD1	P46988	109 aa		2.66	□□□□□ -1.98
snR80	snR80	YGR283C	P53336	341 aa	Predicted RBP	2.66	□□□□□ -1.98
snR80	snR80	PRI2	P20457	528 aa		2.65	□□□□□ -1.99
snR80	snR80	PRP28	P23394	588 aa		2.65	□□□□□ -1.99
snR80	snR80	PEX1	P24004	1043 aa		2.65	□□□□□ -1.99
snR80	snR80	TSR4	P25040	408 aa		2.65	□□□□□ -1.99
snR80	snR80	ECM32	P32644	1121 aa	Known RBP	2.65	□□□□□ -1.99
snR80	snR80	STE5	P32917	917 aa		2.65	□□□□□ -1.99
snR80	snR80	MIT1	P40002	666 aa		2.65	□□□□□ -1.99
snR80	snR80	ASN1	P49089	572 aa	Known RBP	2.65	□□□□□ -1.99
snR80	snR80	LSC1	P53598	329 aa	Known RBP	2.65	□□□□□ -1.99
snR80	snR80	ORC4	P54791	529 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 89.3 ms