RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W RTC4P53850 401 aa8.15□□□□□ -1.1
PRE5YMR314W CDD1Q06549 142 aa8.15□□□□□ -1.1
PRE5YMR314W SGT2Q12118 346 aaKnown RBP8.15□□□□□ -1.1
PRE5YMR314W ASP3-2P0CX77 362 aa8.14□□□□□ -1.11
PRE5YMR314W ASP3-3P0CX78 362 aa8.14□□□□□ -1.11
PRE5YMR314W ASP3-4P0CX79 362 aa8.14□□□□□ -1.11
PRE5YMR314W ASP3-1P0CZ17 362 aa8.14□□□□□ -1.11
PRE5YMR314W RAM2P29703 316 aa8.14□□□□□ -1.11
PRE5YMR314W SWE1P32944 819 aa8.14□□□□□ -1.11
PRE5YMR314W PTC3P34221 468 aaKnown RBP8.14□□□□□ -1.11
PRE5YMR314W TCD2P36101 447 aaKnown RBP8.14□□□□□ -1.11
PRE5YMR314W TIF5P38431 405 aaKnown RBP8.14□□□□□ -1.11
PRE5YMR314W RMD8P43620 662 aa8.14□□□□□ -1.11
PRE5YMR314W GUP1P53154 560 aa8.14□□□□□ -1.11
PRE5YMR314W TOF1P53840 1238 aa8.14□□□□□ -1.11
PRE5YMR314W PDC6P26263 563 aaKnown RBP8.13□□□□□ -1.11
PRE5YMR314W GAC1P28006 793 aa8.13□□□□□ -1.11
PRE5YMR314W SHE3P38272 425 aaKnown RBP8.13□□□□□ -1.11
PRE5YMR314W YHL017WP38745 532 aa8.13□□□□□ -1.11
PRE5YMR314W RAD55P38953 406 aa8.13□□□□□ -1.11
PRE5YMR314W BUD6P41697 788 aa8.13□□□□□ -1.11
PRE5YMR314W KRE33P53914 1056 aaKnown RBP8.13□□□□□ -1.11
PRE5YMR314W SEC5P89102 971 aa8.13□□□□□ -1.11
PRE5YMR314W YDL129WQ07555 291 aa8.13□□□□□ -1.11
PRE5YMR314W NDJ1Q12366 352 aa8.13□□□□□ -1.11
PRE5YMR314W YDL206WQ12424 762 aa8.13□□□□□ -1.11
PRE5YMR314W HSP82P02829 709 aaKnown RBP8.12□□□□□ -1.11
PRE5YMR314W TRL1P09880 827 aaKnown RBP8.12□□□□□ -1.11
PRE5YMR314W FPR1P20081 114 aaKnown RBP8.12□□□□□ -1.11
PRE5YMR314W TBS1P38114 1094 aa8.12□□□□□ -1.11
PRE5YMR314W WAR1Q03631 944 aa8.12□□□□□ -1.11
PRE5YMR314W HPF1Q05164 967 aa8.12□□□□□ -1.11
PRE5YMR314W GPM2Q12008 311 aa8.12□□□□□ -1.11
PRE5YMR314W TSR3Q12094 313 aaKnown RBP8.12□□□□□ -1.11
PRE5YMR314W DCS2Q12123 353 aa8.12□□□□□ -1.11
PRE5YMR314W BI4P03879 638 aa8.11□□□□□ -1.11
PRE5YMR314W TKL2P33315 681 aa8.11□□□□□ -1.11
PRE5YMR314W KDX1P36005 433 aa8.11□□□□□ -1.11
PRE5YMR314W PET10P36139 283 aa8.11□□□□□ -1.11
PRE5YMR314W YBR056WP38081 501 aa8.11□□□□□ -1.11
PRE5YMR314W NUP60P39705 539 aa8.11□□□□□ -1.11
PRE5YMR314W UTP14Q04500 899 aaKnown RBP8.11□□□□□ -1.11
PRE5YMR314W PRM6Q04705 352 aa8.11□□□□□ -1.11
PRE5YMR314W EIS1Q05050 843 aaKnown RBP8.11□□□□□ -1.11
PRE5YMR314W CSF1Q12150 2958 aa8.11□□□□□ -1.11
PRE5YMR314W VMA1P17255 1071 aaKnown RBP8.1□□□□□ -1.11
PRE5YMR314W KIN3P22209 435 aa8.1□□□□□ -1.11
PRE5YMR314W TFB1P32776 642 aa8.1□□□□□ -1.11
PRE5YMR314W NPP2P39997 493 aa8.1□□□□□ -1.11
PRE5YMR314W YIL161WP40449 235 aaKnown RBP8.1□□□□□ -1.11
PRE5YMR314W THI6P41835 540 aa8.1□□□□□ -1.11
PRE5YMR314W YAT1P80235 687 aa8.1□□□□□ -1.11
PRE5YMR314W CEG1Q01159 459 aaPredicted RBP8.1□□□□□ -1.11
PRE5YMR314W SEG1Q04279 960 aa8.1□□□□□ -1.11
PRE5YMR314W HFA1P32874 2273 aa8.09□□□□□ -1.11
PRE5YMR314W FOB1O13329 566 aa8.09□□□□□ -1.11
PRE5YMR314W HSF1P10961 833 aa8.09□□□□□ -1.11
PRE5YMR314W REV1P12689 985 aa8.09□□□□□ -1.11
PRE5YMR314W ISY1P21374 235 aaPredicted RBP8.09□□□□□ -1.11
PRE5YMR314W STE5P32917 917 aa8.09□□□□□ -1.11
PRE5YMR314W UBA2P52488 636 aa8.09□□□□□ -1.11
PRE5YMR314W TOF2Q02208 771 aa8.09□□□□□ -1.11
PRE5YMR314W PTC5Q12511 572 aa8.09□□□□□ -1.11
PRE5YMR314W PHO8P11491 566 aa8.08□□□□□ -1.12
PRE5YMR314W AGP2P38090 596 aa8.08□□□□□ -1.12
PRE5YMR314W GDH3P39708 457 aa8.08□□□□□ -1.12
PRE5YMR314W OSW5P40219 148 aa8.08□□□□□ -1.12
PRE5YMR314W YIR007WP40566 764 aa8.08□□□□□ -1.12
PRE5YMR314W HSH155P49955 971 aaKnown RBP8.08□□□□□ -1.12
PRE5YMR314W YNR065CP53751 1116 aa8.08□□□□□ -1.12
PRE5YMR314W FAR11P53917 953 aa8.08□□□□□ -1.12
PRE5YMR314W YCG1Q06680 1035 aa8.08□□□□□ -1.12
PRE5YMR314W PSK2Q08217 1101 aa8.08□□□□□ -1.12
PRE5YMR314W YPL277CQ08989 487 aa8.08□□□□□ -1.12
PRE5YMR314W UTH1P36135 365 aa8.07□□□□□ -1.12
PRE5YMR314W ATG12P38316 186 aa8.07□□□□□ -1.12
PRE5YMR314W PPX1P38698 397 aa8.07□□□□□ -1.12
PRE5YMR314W OCA5P38738 679 aa8.07□□□□□ -1.12
PRE5YMR314W SNF7P39929 240 aaKnown RBP8.07□□□□□ -1.12
PRE5YMR314W SHQ1P40486 507 aaPredicted RBP8.07□□□□□ -1.12
PRE5YMR314W DAK2P43550 591 aa8.07□□□□□ -1.12
PRE5YMR314W NPA3P47122 385 aa8.07□□□□□ -1.12
PRE5YMR314W GCN5Q03330 439 aa8.07□□□□□ -1.12
PRE5YMR314W OPT2Q06593 877 aa8.07□□□□□ -1.12
PRE5YMR314W NAT1P12945 854 aaKnown RBP8.06□□□□□ -1.12
PRE5YMR314W PIK1P39104 1066 aa8.06□□□□□ -1.12
PRE5YMR314W ERG10P41338 398 aaKnown RBP8.06□□□□□ -1.12
PRE5YMR314W DAS1P47005 663 aa8.06□□□□□ -1.12
PRE5YMR314W VPS70P47161 811 aa8.06□□□□□ -1.12
PRE5YMR314W YNL011CP53980 444 aa8.06□□□□□ -1.12
PRE5YMR314W MEC1P38111 2368 aa8.06□□□□□ -1.12
PRE5YMR314W CHS1P08004 1131 aa8.05□□□□□ -1.12
PRE5YMR314W PUF4P25339 888 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
PRE5YMR314W GUT1P32190 709 aa8.05□□□□□ -1.12
PRE5YMR314W YEL1P34225 687 aa8.05□□□□□ -1.12
PRE5YMR314W SAP190P36123 1033 aa8.05□□□□□ -1.12
PRE5YMR314W PPS1P38148 807 aa8.05□□□□□ -1.12
PRE5YMR314W YER158CP40095 573 aa8.05□□□□□ -1.12
PRE5YMR314W NUP84P52891 726 aa8.05□□□□□ -1.12
PRE5YMR314W YPR027CQ12079 277 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms