RNA–Protein interactions for RNA: YMR257C

PET111, Mitochondrial translational activator specific for the COX2 mRNA, yeast

Gene PET111, Length 2,403 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PET111	YMR257C	UBS1	P38290	277 aa		0.85	□□□□□ -2.27
PET111	YMR257C	YHR112C	P38716	378 aa		0.85	□□□□□ -2.27
PET111	YMR257C	SSZ1	P38788	538 aa	Known RBP	0.85	□□□□□ -2.27
PET111	YMR257C	SAK1	P38990	1142 aa		0.85	□□□□□ -2.27
PET111	YMR257C	LYS9	P38999	446 aa		0.85	□□□□□ -2.27
PET111	YMR257C	HXT6	P39003	570 aa	Known RBP	0.85	□□□□□ -2.27
PET111	YMR257C	HXT7	P39004	570 aa		0.85	□□□□□ -2.27
PET111	YMR257C	DSS1	P39112	969 aa		0.85	□□□□□ -2.27
PET111	YMR257C	BAP3	P41815	604 aa		0.85	□□□□□ -2.27
PET111	YMR257C	OSW7	P43611	510 aa		0.85	□□□□□ -2.27
PET111	YMR257C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
PET111	YMR257C	UBC9	P50623	157 aa	Predicted RBP	0.85	□□□□□ -2.27
PET111	YMR257C	YNR029C	P53729	429 aa	Known RBP	0.85	□□□□□ -2.27
PET111	YMR257C	NHX1	Q04121	633 aa		0.85	□□□□□ -2.27
PET111	YMR257C	YDR514C	Q04408	483 aa		0.85	□□□□□ -2.27
PET111	YMR257C	PEX19	Q07418	342 aa		0.85	□□□□□ -2.27
PET111	YMR257C	TRM11	Q12463	433 aa		0.85	□□□□□ -2.27
PET111	YMR257C	RPS9A	O13516	197 aa	Known RBP	0.84	□□□□□ -2.27
PET111	YMR257C	DIF1	O13577	133 aa		0.84	□□□□□ -2.27
PET111	YMR257C	YLR415C	O13578	112 aa		0.84	□□□□□ -2.27
PET111	YMR257C	IME1	P21190	360 aa		0.84	□□□□□ -2.27
PET111	YMR257C	EFT1	P32324	842 aa	Known RBP	0.84	□□□□□ -2.27
PET111	YMR257C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.27	not detected
PET111	YMR257C	NUG1	P40010	520 aa	Known RBP	0.84	□□□□□ -2.27
PET111	YMR257C	GET2	P40056	285 aa		0.84	□□□□□ -2.27
PET111	YMR257C	ALY2	P47029	1046 aa		0.84	□□□□□ -2.27
PET111	YMR257C	YJR039W	P47107	1121 aa		0.84	□□□□□ -2.27
PET111	YMR257C	PCL10	P53124	433 aa		0.84	□□□□□ -2.27
PET111	YMR257C	TEX1	P53851	422 aa	Known RBP	0.84	□□□□□ -2.27
PET111	YMR257C	ARG5,6	Q01217	863 aa		0.84	□□□□□ -2.27
PET111	YMR257C	RCR2	Q03446	210 aa	Known RBP	0.84	□□□□□ -2.27
PET111	YMR257C	POB3	Q04636	552 aa	Known RBP	0.84	□□□□□ -2.27
PET111	YMR257C	CRR1	Q05790	422 aa		0.84	□□□□□ -2.27
PET111	YMR257C	TGL5	Q12043	749 aa		0.84	□□□□□ -2.27
PET111	YMR257C	HRP1	Q99383	534 aa	Known RBP	0.84	□□□□□ -2.27
PET111	YMR257C	RPP2A	P05319	106 aa	Known RBP	0.84	□□□□□ -2.28
PET111	YMR257C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.28	not detected
PET111	YMR257C	HRR25	P29295	494 aa	Known RBP	0.84	□□□□□ -2.28
PET111	YMR257C	HIR1	P32479	840 aa		0.84	□□□□□ -2.28
PET111	YMR257C	GRX4	P32642	244 aa		0.84	□□□□□ -2.28
PET111	YMR257C	AKL1	P38080	1108 aa	Known RBP	0.84	□□□□□ -2.28
PET111	YMR257C	HSL7	P38274	827 aa		0.84	□□□□□ -2.28
PET111	YMR257C	ENP1	P38333	483 aa	Known RBP	0.84	□□□□□ -2.28
PET111	YMR257C	BEM4	P39011	633 aa		0.84	□□□□□ -2.28
PET111	YMR257C	UBP12	P39538	1254 aa		0.84	□□□□□ -2.28
PET111	YMR257C	ECM1	P39715	212 aa		0.84	□□□□□ -2.28
PET111	YMR257C	YNL195C	P40168	261 aa		0.84	□□□□□ -2.28
PET111	YMR257C	GPP1	P41277	250 aa	Known RBP	0.84	□□□□□ -2.28
PET111	YMR257C	FKH2	P41813	862 aa		0.84	□□□□□ -2.28
PET111	YMR257C	YJL163C	P46996	555 aa		0.84	□□□□□ -2.28
PET111	YMR257C	YJR096W	P47137	282 aa		0.84	□□□□□ -2.28
PET111	YMR257C	MTL1	P53214	551 aa		0.84	□□□□□ -2.28
PET111	YMR257C	ECM9	Q02202	377 aa		0.84	□□□□□ -2.28
PET111	YMR257C	PKH1	Q03407	766 aa		0.84	□□□□□ -2.28
PET111	YMR257C	MTQ2	Q03920	221 aa	Predicted RBP	0.84	□□□□□ -2.28
PET111	YMR257C	THI73	Q07904	523 aa		0.84	□□□□□ -2.28
PET111	YMR257C	YOL073C	Q08232	322 aa		0.84	□□□□□ -2.28
PET111	YMR257C	IRC13	Q08630	104 aa		0.84	□□□□□ -2.28
PET111	YMR257C	YOR352W	Q08816	343 aa		0.84	□□□□□ -2.28
PET111	YMR257C	GIN4	Q12263	1142 aa		0.84	□□□□□ -2.28
PET111	YMR257C	SWM1	Q12379	170 aa		0.84	□□□□□ -2.28
PET111	YMR257C	ADR1	P07248	1323 aa		0.83	□□□□□ -2.28
PET111	YMR257C	SIR3	P06701	978 aa		0.83	□□□□□ -2.28
PET111	YMR257C	PPR1	P07272	904 aa	Predicted RBP	0.83	□□□□□ -2.28
PET111	YMR257C	RPS21A	P0C0V8	87 aa	Known RBP	0.83	□□□□□ -2.28
PET111	YMR257C	LAT1	P12695	482 aa	Known RBP	0.83	□□□□□ -2.28
PET111	YMR257C	CDC26	P14724	124 aa		0.83	□□□□□ -2.28
PET111	YMR257C	GSY1	P23337	708 aa		0.83	□□□□□ -2.28
PET111	YMR257C	CAD1	P24813	409 aa	Known RBP	0.83	□□□□□ -2.28
PET111	YMR257C	ERG4	P25340	473 aa		0.83	□□□□□ -2.28
PET111	YMR257C	MSS1	P32559	526 aa	Predicted RBP	0.83	□□□□□ -2.28
PET111	YMR257C	SER1	P33330	395 aa	Known RBP	0.83	□□□□□ -2.28
PET111	YMR257C	APL2	P36000	726 aa	Predicted RBP	0.83	□□□□□ -2.28
PET111	YMR257C	SAP190	P36123	1033 aa		0.83	□□□□□ -2.28
PET111	YMR257C	MAL31	P38156	614 aa		0.83	□□□□□ -2.28
PET111	YMR257C	MOH1	P38191	138 aa		0.83	□□□□□ -2.28
PET111	YMR257C	FAT1	P38225	669 aa		0.83	□□□□□ -2.28
PET111	YMR257C	BCD1	P38772	366 aa		0.83	□□□□□ -2.28
PET111	YMR257C	FMO1	P38866	432 aa		0.83	□□□□□ -2.28
PET111	YMR257C	ELO3	P40319	345 aa		0.83	□□□□□ -2.28
PET111	YMR257C	CCT5	P40413	562 aa	Known RBP	0.83	□□□□□ -2.28
PET111	YMR257C	SHR5	P41912	237 aa		0.83	□□□□□ -2.28
PET111	YMR257C	MUP1	P50276	574 aa		0.83	□□□□□ -2.28
PET111	YMR257C	UBA2	P52488	636 aa		0.83	□□□□□ -2.28
PET111	YMR257C	NPY1	P53164	384 aa		0.83	□□□□□ -2.28
PET111	YMR257C	PUS2	P53167	370 aa		0.83	□□□□□ -2.28
PET111	YMR257C	MUK1	Q02866	612 aa		0.83	□□□□□ -2.28
PET111	YMR257C	VPS30	Q02948	557 aa		0.83	□□□□□ -2.28
PET111	YMR257C	COG8	Q04632	607 aa		0.83	□□□□□ -2.28
PET111	YMR257C	ADY4	Q05955	493 aa		0.83	□□□□□ -2.28
PET111	YMR257C	RPN7	Q06103	429 aa	Known RBP	0.83	□□□□□ -2.28
PET111	YMR257C	YPS7	Q06325	596 aa		0.83	□□□□□ -2.28
PET111	YMR257C	FRE5	Q08908	694 aa		0.83	□□□□□ -2.28
PET111	YMR257C	ALG7	P07286	448 aa		0.83	□□□□□ -2.28
PET111	YMR257C	SWI6	P09959	803 aa		0.83	□□□□□ -2.28
PET111	YMR257C	RNR1	P21524	888 aa	Known RBP	0.83	□□□□□ -2.28
PET111	YMR257C	MTC7	P32633	139 aa		0.83	□□□□□ -2.28
PET111	YMR257C	KTR4	P38131	464 aa		0.83	□□□□□ -2.28
PET111	YMR257C	PPS1	P38148	807 aa		0.83	□□□□□ -2.28
PET111	YMR257C	BRN1	P38170	754 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms