RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C BRR1Q99177 341 aaPredicted RBP1.05□□□□□ -2.24
RKR1YMR247C NOP14Q99207 810 aaKnown RBP1.05□□□□□ -2.24
RKR1YMR247C CYC1P00044 109 aaPredicted RBP1.04□□□□□ -2.24
RKR1YMR247C PHO8P11491 566 aa1.04□□□□□ -2.24
RKR1YMR247C SEC12P11655 471 aa1.04□□□□□ -2.24
RKR1YMR247C BIK1P11709 440 aa1.04□□□□□ -2.24
RKR1YMR247C NCP1P16603 691 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C SPO16P17122 198 aa1.04□□□□□ -2.24
RKR1YMR247C RAD53P22216 821 aa1.04□□□□□ -2.24
RKR1YMR247C PEX1P24004 1043 aa1.04□□□□□ -2.24
RKR1YMR247C ERG4P25340 473 aa1.04□□□□□ -2.24
RKR1YMR247C PTH2P34222 208 aa1.04□□□□□ -2.24
RKR1YMR247C BUD6P41697 788 aa1.04□□□□□ -2.24
RKR1YMR247C CIR1P42940 261 aa1.04□□□□□ -2.24
RKR1YMR247C SMC3P47037 1230 aa1.04□□□□□ -2.24
RKR1YMR247C TIM54P47045 478 aa1.04□□□□□ -2.24
RKR1YMR247C MTR3P48240 250 aaPredicted RBP1.04□□□□□ -2.24
RKR1YMR247C PCL10P53124 433 aa1.04□□□□□ -2.24
RKR1YMR247C IRC10Q08118 586 aa1.04□□□□□ -2.24
RKR1YMR247C ALG6Q12001 544 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C TAF3Q12297 353 aa1.04□□□□□ -2.24
RKR1YMR247C ZRT2Q12436 422 aa1.04□□□□□ -2.24
RKR1YMR247C MRP10O75012 95 aa1.04□□□□□ -2.24
RKR1YMR247C GCD1P09032 578 aaPredicted RBP1.04□□□□□ -2.24
RKR1YMR247C RAD4P14736 754 aa1.04□□□□□ -2.24
RKR1YMR247C ATE1P16639 503 aa1.04□□□□□ -2.24
RKR1YMR247C CRP1P38845 465 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C RSP5P39940 809 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C SIP5P40210 489 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C PFD1P46988 109 aa1.04□□□□□ -2.24
RKR1YMR247C SMX3P54999 86 aaPredicted RBP1.04□□□□□ -2.24
RKR1YMR247C NGL2Q03264 515 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C PEX19Q07418 342 aa1.04□□□□□ -2.24
RKR1YMR247C MCH5Q08777 521 aa1.04□□□□□ -2.24
RKR1YMR247C BAG7Q12128 409 aa1.04□□□□□ -2.24
RKR1YMR247C YGR161W-CQ3E744 92 aa1.04□□□□□ -2.24
RKR1YMR247C HBN1Q96VH4 193 aa1.04□□□□□ -2.24
RKR1YMR247C GRX1P25373 110 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C APL3P38065 1025 aa1.04□□□□□ -2.24
RKR1YMR247C RKM3P38222 552 aa1.04□□□□□ -2.24
RKR1YMR247C GDH3P39708 457 aa1.04□□□□□ -2.24
RKR1YMR247C DOT6P40059 670 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C ALR2P43553 858 aa1.04□□□□□ -2.24
RKR1YMR247C TAN1P53072 289 aaPredicted RBP1.04□□□□□ -2.24
RKR1YMR247C ORM2Q06144 216 aa1.04□□□□□ -2.24
RKR1YMR247C YPL216WQ08964 1102 aa1.04□□□□□ -2.24
RKR1YMR247C YNL162W-AQ3E7A8 72 aa1.04□□□□□ -2.24
RKR1YMR247C MET6P05694 767 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C HEM13P11353 328 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C CCR4P31384 837 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C TOD6P34219 525 aa1.04□□□□□ -2.24
RKR1YMR247C MDJ1P35191 511 aa1.04□□□□□ -2.24
RKR1YMR247C GLG1P36143 616 aa1.04□□□□□ -2.24
RKR1YMR247C BRN1P38170 754 aa1.04□□□□□ -2.24
RKR1YMR247C YBR184WP38299 523 aa1.04□□□□□ -2.24
RKR1YMR247C CHS7P38843 316 aa1.04□□□□□ -2.24
RKR1YMR247C CKB2P38930 258 aa1.04□□□□□ -2.24
RKR1YMR247C CCT5P40413 562 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C SHR5P41912 237 aa1.04□□□□□ -2.24
RKR1YMR247C SLD3P53135 668 aa1.04□□□□□ -2.24
RKR1YMR247C PEF1P53238 335 aa1.04□□□□□ -2.24
RKR1YMR247C DUS1P53759 423 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C ALD6P54115 500 aaKnown RBP1.04□□□□□ -2.24
RKR1YMR247C HOF1Q05080 669 aa1.04□□□□□ -2.24
RKR1YMR247C FRE5Q08908 694 aa1.04□□□□□ -2.24
RKR1YMR247C YBR255C-AQ3E776 120 aa1.04□□□□□ -2.24
RKR1YMR247C ENA1P13587 1091 aa1.03□□□□□ -2.24
RKR1YMR247C CMP2P14747 604 aa1.03□□□□□ -2.24
RKR1YMR247C NAM7P30771 971 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C RTT107P38850 1070 aa1.03□□□□□ -2.24
RKR1YMR247C PLB1P39105 664 aa1.03□□□□□ -2.24
RKR1YMR247C FYV10P40492 516 aa1.03□□□□□ -2.24
RKR1YMR247C YFL052WP43551 465 aa1.03□□□□□ -2.24
RKR1YMR247C HXT16P47185 567 aa1.03□□□□□ -2.24
RKR1YMR247C RNR4P49723 345 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C UBC11P52492 156 aa1.03□□□□□ -2.24
RKR1YMR247C NPY1P53164 384 aa1.03□□□□□ -2.24
RKR1YMR247C ENA2Q01896 1091 aa1.03□□□□□ -2.24
RKR1YMR247C PEX15Q08215 383 aa1.03□□□□□ -2.24
RKR1YMR247C TRE2Q08693 809 aa1.03□□□□□ -2.24
RKR1YMR247C YPL191CQ08930 360 aa1.03□□□□□ -2.24
RKR1YMR247C CDC53Q12018 815 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C AIM41Q12032 185 aa1.03□□□□□ -2.24
RKR1YMR247C NBP2Q12163 236 aa1.03□□□□□ -2.24
RKR1YMR247C POM34Q12445 299 aa1.03□□□□□ -2.24
RKR1YMR247C ENA5Q12691 1091 aa1.03□□□□□ -2.24
RKR1YMR247C CET1O13297 549 aaPredicted RBP1.03□□□□□ -2.24
RKR1YMR247C WHI2P12611 486 aa1.03□□□□□ -2.24
RKR1YMR247C EUG1P32474 517 aa1.03□□□□□ -2.24
RKR1YMR247C XRS2P33301 854 aa1.03□□□□□ -2.24
RKR1YMR247C UTP9P38882 575 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C YJL206CP39529 758 aa1.03□□□□□ -2.24
RKR1YMR247C PAC2P39937 518 aa1.03□□□□□ -2.24
RKR1YMR247C VAC8P39968 578 aa1.03□□□□□ -2.24
RKR1YMR247C TOK1P40310 691 aa1.03□□□□□ -2.24
RKR1YMR247C SET2P46995 733 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C YGL242CP53066 181 aa1.03□□□□□ -2.24
RKR1YMR247C MCM6P53091 1017 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C HUL5P53119 910 aa1.03□□□□□ -2.24
RKR1YMR247C ERG5P54781 538 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms