RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C BCH2P36122 765 aa9.75□□□□□ -0.85
SEC61YLR378C OLA1P38219 394 aaKnown RBP9.75□□□□□ -0.85
SEC61YLR378C HIS2P38635 335 aa9.75□□□□□ -0.85
SEC61YLR378C DUS1P53759 423 aaKnown RBP9.75□□□□□ -0.85
SEC61YLR378C CWC21Q03375 135 aaKnown RBP9.75□□□□□ -0.85
SEC61YLR378C ERV41Q04651 352 aa9.75□□□□□ -0.85
SEC61YLR378C PUF3Q07807 879 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
SEC61YLR378C NUR1Q12066 484 aa9.75□□□□□ -0.85
SEC61YLR378C MOT1P32333 1867 aa9.75□□□□□ -0.85
SEC61YLR378C YLR462WO13556 202 aa9.74□□□□□ -0.85
SEC61YLR378C YER152CP10356 443 aa9.74□□□□□ -0.85
SEC61YLR378C RNR1P21524 888 aaKnown RBP9.74□□□□□ -0.85
SEC61YLR378C DBF4P32325 704 aa9.74□□□□□ -0.85
SEC61YLR378C RRT2P38332 387 aa9.74□□□□□ -0.85
SEC61YLR378C YHL049CP38722 271 aa9.74□□□□□ -0.85
SEC61YLR378C TDA3P38758 523 aa9.74□□□□□ -0.85
SEC61YLR378C YEL075CP39972 122 aa9.74□□□□□ -0.85
SEC61YLR378C YER189WP40104 122 aa9.74□□□□□ -0.85
SEC61YLR378C YFL064CP43540 174 aa9.74□□□□□ -0.85
SEC61YLR378C LAM5P43560 674 aa9.74□□□□□ -0.85
SEC61YLR378C ISM1P48526 1002 aa9.74□□□□□ -0.85
SEC61YLR378C EEB1Q02891 456 aa9.74□□□□□ -0.85
SEC61YLR378C URH1Q04179 340 aa9.74□□□□□ -0.85
SEC61YLR378C ECI1Q05871 280 aa9.74□□□□□ -0.85
SEC61YLR378C APL5Q08951 932 aaKnown RBP9.74□□□□□ -0.85
SEC61YLR378C SPO21Q12411 609 aa9.74□□□□□ -0.85
SEC61YLR378C YBL111CQ3E7Y5 667 aa9.74□□□□□ -0.85
SEC61YLR378C ECM3Q99252 613 aa9.74□□□□□ -0.85
SEC61YLR378C PRR1P28708 518 aa9.73□□□□□ -0.85
SEC61YLR378C UBC6P33296 250 aaPredicted RBP9.73□□□□□ -0.85
SEC61YLR378C DUR3P33413 735 aa9.73□□□□□ -0.85
SEC61YLR378C NCL1P38205 684 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C SAK1P38990 1142 aa9.73□□□□□ -0.85
SEC61YLR378C ALD5P40047 520 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C SAD1P43589 448 aa9.73□□□□□ -0.85
SEC61YLR378C PHO86P46956 311 aa9.73□□□□□ -0.85
SEC61YLR378C ATG16Q03818 150 aa9.73□□□□□ -0.85
SEC61YLR378C DOT1Q04089 582 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C YDR222WQ04925 415 aa9.73□□□□□ -0.85
SEC61YLR378C NOP6Q07623 225 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C GAL10P04397 699 aa9.73□□□□□ -0.85
SEC61YLR378C RPL4AP10664 362 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C GLN3P18494 730 aa9.73□□□□□ -0.85
SEC61YLR378C ADE2P21264 571 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C EFB1P32471 206 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C SAH1P39954 449 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C LCP5P40079 357 aaPredicted RBP9.73□□□□□ -0.85
SEC61YLR378C AIM21P40563 679 aa9.73□□□□□ -0.85
SEC61YLR378C YMR1P47147 688 aaKnown RBP RIP-Chip data9.73□□□□□ -0.85not detected
SEC61YLR378C RPL4BP49626 362 aaKnown RBP9.73□□□□□ -0.85
SEC61YLR378C YLR455WQ06188 304 aa9.73□□□□□ -0.85
SEC61YLR378C AIM41Q12032 185 aa9.73□□□□□ -0.85
SEC61YLR378C RMP1Q12530 201 aa9.73□□□□□ -0.85
SEC61YLR378C SCJ1P25303 377 aa9.72□□□□□ -0.85
SEC61YLR378C GCG1P32656 232 aaKnown RBP9.72□□□□□ -0.85
SEC61YLR378C RIM101P33400 625 aa9.72□□□□□ -0.85
SEC61YLR378C CAB3P36076 571 aa9.72□□□□□ -0.85
SEC61YLR378C YHR054CP38780 354 aa9.72□□□□□ -0.85
SEC61YLR378C BRO1P48582 844 aa9.72□□□□□ -0.85
SEC61YLR378C ALT1P52893 592 aa9.72□□□□□ -0.85
SEC61YLR378C HOP2P53187 214 aa9.72□□□□□ -0.85
SEC61YLR378C ALG11P53954 548 aaKnown RBP9.72□□□□□ -0.85
SEC61YLR378C VPS72Q03388 795 aa9.72□□□□□ -0.85
SEC61YLR378C RIO1Q12196 484 aaKnown RBP9.72□□□□□ -0.85
SEC61YLR378C GYP6P32806 458 aa9.71□□□□□ -0.86
SEC61YLR378C ULI1P43604 169 aa9.71□□□□□ -0.86
SEC61YLR378C PRY3P47033 881 aa9.71□□□□□ -0.86
SEC61YLR378C AZR1P50080 613 aa9.71□□□□□ -0.86
SEC61YLR378C MAM3Q12296 706 aa9.71□□□□□ -0.86
SEC61YLR378C MDM20Q12387 796 aaKnown RBP9.71□□□□□ -0.86
SEC61YLR378C PCD1Q12524 340 aa9.71□□□□□ -0.86
SEC61YLR378C RIF1P29539 1916 aa9.71□□□□□ -0.86
SEC61YLR378C COX4P04037 155 aa9.7□□□□□ -0.86
SEC61YLR378C YBL055CP34220 418 aaPredicted RBP9.7□□□□□ -0.86
SEC61YLR378C NOP4P37838 685 aaKnown RBP9.7□□□□□ -0.86
SEC61YLR378C PTC4P38089 393 aa9.7□□□□□ -0.86
SEC61YLR378C YAP1801P38856 637 aa9.7□□□□□ -0.86
SEC61YLR378C PMC1P38929 1173 aaPredicted RBP9.7□□□□□ -0.86
SEC61YLR378C YGL036WP53185 909 aaPredicted RBP9.7□□□□□ -0.86
SEC61YLR378C YNL134CP53912 376 aaKnown RBP9.7□□□□□ -0.86
SEC61YLR378C GPD1Q00055 391 aaKnown RBP9.7□□□□□ -0.86
SEC61YLR378C MUK1Q02866 612 aa9.7□□□□□ -0.86
SEC61YLR378C PUS1Q12211 544 aaKnown RBP9.7□□□□□ -0.86
SEC61YLR378C ADE3P07245 946 aaKnown RBP9.69□□□□□ -0.86
SEC61YLR378C PMS1P14242 873 aa9.69□□□□□ -0.86
SEC61YLR378C ABD1P32783 436 aaPredicted RBP9.69□□□□□ -0.86
SEC61YLR378C RPT1P33299 467 aaKnown RBP9.69□□□□□ -0.86
SEC61YLR378C DRE2P36152 348 aa9.69□□□□□ -0.86
SEC61YLR378C CBR1P38626 284 aaKnown RBP9.69□□□□□ -0.86
SEC61YLR378C YER186CP40101 306 aa9.69□□□□□ -0.86
SEC61YLR378C ALT2P52892 507 aa9.69□□□□□ -0.86
SEC61YLR378C MND1P53102 219 aa9.69□□□□□ -0.86
SEC61YLR378C ULP1Q02724 621 aa9.69□□□□□ -0.86
SEC61YLR378C YKL068W-AQ3E826 78 aa9.69□□□□□ -0.86
SEC61YLR378C ADE4P04046 510 aaKnown RBP9.68□□□□□ -0.86
SEC61YLR378C PAH1P32567 862 aa9.68□□□□□ -0.86
SEC61YLR378C LAS1P36146 502 aaPredicted RBP9.68□□□□□ -0.86
SEC61YLR378C SPP381P38282 291 aaPredicted RBP9.68□□□□□ -0.86
SEC61YLR378C GEM1P39722 662 aa9.68□□□□□ -0.86
SEC61YLR378C AFG3P39925 761 aa9.68□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms