RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	YJR096W	P47137	282 aa		4.19	□□□□□ -1.74
TPK3	YKL166C	PCL10	P53124	433 aa		4.19	□□□□□ -1.74
TPK3	YKL166C	GPG1	P53130	126 aa		4.19	□□□□□ -1.74
TPK3	YKL166C	UME1	Q03010	460 aa		4.19	□□□□□ -1.74
TPK3	YKL166C	GRX4	P32642	244 aa		4.18	□□□□□ -1.74
TPK3	YKL166C	TYS1	P36421	394 aa	Known RBP	4.18	□□□□□ -1.74
TPK3	YKL166C	CKB2	P38930	258 aa		4.18	□□□□□ -1.74
TPK3	YKL166C	FKH2	P41813	862 aa		4.18	□□□□□ -1.74
TPK3	YKL166C	ARP4	P80428	489 aa		4.18	□□□□□ -1.74
TPK3	YKL166C	NRG1	Q03125	231 aa		4.18	□□□□□ -1.74
TPK3	YKL166C	MTQ2	Q03920	221 aa	Predicted RBP	4.18	□□□□□ -1.74
TPK3	YKL166C	NUP145	P49687	1317 aa		4.18	□□□□□ -1.74
TPK3	YKL166C	HRR25	P29295	494 aa	Known RBP	4.17	□□□□□ -1.74
TPK3	YKL166C	PMI40	P29952	429 aa	Known RBP	4.17	□□□□□ -1.74
TPK3	YKL166C	EFT1	P32324	842 aa	Known RBP	4.17	□□□□□ -1.74
TPK3	YKL166C	PRP19	P32523	503 aa	Known RBP	4.17	□□□□□ -1.74
TPK3	YKL166C	YKL222C	P35995	705 aa		4.17	□□□□□ -1.74
TPK3	YKL166C	MNN4	P36044	1178 aa		4.17	□□□□□ -1.74
TPK3	YKL166C	YBR259W	P38338	688 aa		4.17	□□□□□ -1.74
TPK3	YKL166C	ECM1	P39715	212 aa		4.17	□□□□□ -1.74
TPK3	YKL166C	PRP31	P49704	494 aa	Predicted RBP	4.17	□□□□□ -1.74
TPK3	YKL166C	YGR237C	P50089	785 aa		4.17	□□□□□ -1.74
TPK3	YKL166C	ORC4	P54791	529 aa		4.17	□□□□□ -1.74
TPK3	YKL166C	TGL5	Q12043	749 aa		4.17	□□□□□ -1.74
TPK3	YKL166C	DCS2	Q12123	353 aa		4.17	□□□□□ -1.74
TPK3	YKL166C	TRM2	P33753	639 aa		4.16	□□□□□ -1.74
TPK3	YKL166C	SSZ1	P38788	538 aa	Known RBP	4.16	□□□□□ -1.74
TPK3	YKL166C	YBP2	P53169	641 aa		4.16	□□□□□ -1.74
TPK3	YKL166C	BRE5	P53741	515 aa	Known RBP	4.16	□□□□□ -1.74
TPK3	YKL166C	LEE1	Q02799	301 aa	Known RBP	4.16	□□□□□ -1.74
TPK3	YKL166C	AIM39	Q08223	395 aa		4.16	□□□□□ -1.74
TPK3	YKL166C	TRM13	Q12383	476 aa		4.16	□□□□□ -1.74
TPK3	YKL166C	ADE2	P21264	571 aa	Known RBP	4.15	□□□□□ -1.75
TPK3	YKL166C	TSR4	P25040	408 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	ERG4	P25340	473 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	APL2	P36000	726 aa	Predicted RBP	4.15	□□□□□ -1.75
TPK3	YKL166C	KTR4	P38131	464 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	YEN1	P40028	759 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	GID8	P40208	455 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	GPP1	P41277	250 aa	Known RBP	4.15	□□□□□ -1.75
TPK3	YKL166C	RET2	P43621	546 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	YJR039W	P47107	1121 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	TEX1	P53851	422 aa	Known RBP	4.15	□□□□□ -1.75
TPK3	YKL166C	ARG5,6	Q01217	863 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	DLT1	Q04216	342 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	HFD1	Q04458	532 aa		4.15	□□□□□ -1.75
TPK3	YKL166C	MET3	P08536	511 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	YBR053C	P38235	358 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	YHR112C	P38716	378 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	TDA3	P38758	523 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	ELO3	P40319	345 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	CCT5	P40413	562 aa	Known RBP	4.14	□□□□□ -1.75
TPK3	YKL166C	GZF3	P42944	551 aa	Known RBP	4.14	□□□□□ -1.75
TPK3	YKL166C	MUP1	P50276	574 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	KIN4	Q01919	800 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	YLR040C	Q07988	224 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	FAP7	Q12055	197 aa	Predicted RBP	4.14	□□□□□ -1.75
TPK3	YKL166C	ATG11	Q12527	1178 aa		4.14	□□□□□ -1.75
TPK3	YKL166C	LAT1	P12695	482 aa	Known RBP	4.13	□□□□□ -1.75
TPK3	YKL166C	CAF20	P12962	161 aa	Known RBP	4.13	□□□□□ -1.75
TPK3	YKL166C	AKL1	P38080	1108 aa	Known RBP	4.13	□□□□□ -1.75
TPK3	YKL166C	MAL31	P38156	614 aa		4.13	□□□□□ -1.75
TPK3	YKL166C	BEM4	P39011	633 aa		4.13	□□□□□ -1.75
TPK3	YKL166C	YIR042C	P40586	236 aa		4.13	□□□□□ -1.75
TPK3	YKL166C	SET2	P46995	733 aa	Known RBP	4.13	□□□□□ -1.75
TPK3	YKL166C	AMA1	P50082	593 aa		4.13	□□□□□ -1.75
TPK3	YKL166C	SUN4	P53616	420 aa		4.13	□□□□□ -1.75
TPK3	YKL166C	HMO1	Q03973	246 aa	Known RBP	4.13	□□□□□ -1.75
TPK3	YKL166C	URN1	Q06525	465 aa	Known RBP	4.13	□□□□□ -1.75
TPK3	YKL166C	MCM21	Q06675	368 aa		4.13	□□□□□ -1.75
TPK3	YKL166C	YTM1	Q12024	460 aa	Predicted RBP	4.13	□□□□□ -1.75
TPK3	YKL166C	TUB2	P02557	457 aa	Known RBP	4.12	□□□□□ -1.75
TPK3	YKL166C	APN2	P38207	520 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	OAF1	P39720	1047 aa	Predicted RBP	4.12	□□□□□ -1.75
TPK3	YKL166C	NUG1	P40010	520 aa	Known RBP	4.12	□□□□□ -1.75
TPK3	YKL166C	HOS4	P40480	1083 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	AIM21	P40563	679 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	BAP3	P41815	604 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	YGR153W	P48238	217 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	MSE1	P48525	536 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	ECM9	Q02202	377 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	GAD1	Q04792	585 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	FRE5	Q08908	694 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	PUS9	Q12069	462 aa		4.12	□□□□□ -1.75
TPK3	YKL166C	ALG7	P07286	448 aa		4.11	□□□□□ -1.75
TPK3	YKL166C	ERG6	P25087	383 aa	Known RBP	4.11	□□□□□ -1.75
TPK3	YKL166C	TRZ1	P36159	838 aa	Predicted RBP	4.11	□□□□□ -1.75
TPK3	YKL166C	APT2	P36973	181 aa		4.11	□□□□□ -1.75
TPK3	YKL166C	SUL1	P38359	859 aa		4.11	□□□□□ -1.75
TPK3	YKL166C	HXT6	P39003	570 aa	Known RBP	4.11	□□□□□ -1.75
TPK3	YKL166C	HXT7	P39004	570 aa		4.11	□□□□□ -1.75
TPK3	YKL166C	MNN11	P46985	422 aa	Known RBP	4.11	□□□□□ -1.75
TPK3	YKL166C	GPD1	Q00055	391 aa	Known RBP	4.11	□□□□□ -1.75
TPK3	YKL166C	RNT1	Q02555	471 aa		4.11	□□□□□ -1.75
TPK3	YKL166C	REC102	Q02721	264 aa		4.11	□□□□□ -1.75
TPK3	YKL166C	ADY4	Q05955	493 aa		4.11	□□□□□ -1.75
TPK3	YKL166C	YOL073C	Q08232	322 aa		4.11	□□□□□ -1.75
TPK3	YKL166C	HRP1	Q99383	534 aa	Known RBP	4.11	□□□□□ -1.75
TPK3	YKL166C	PPR1	P07272	904 aa	Predicted RBP	4.1	□□□□□ -1.75
TPK3	YKL166C	PYC1	P11154	1178 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms