RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C CUE3P53137 624 aaKnown RBP8.98□□□□□ -0.97
SOD2YHR008C ARP5P53946 755 aa8.98□□□□□ -0.97
SOD2YHR008C YLR407WQ06070 228 aa8.98□□□□□ -0.97
SOD2YHR008C CDD1Q06549 142 aa8.98□□□□□ -0.97
SOD2YHR008C SGT2Q12118 346 aaKnown RBP8.98□□□□□ -0.97
SOD2YHR008C NDJ1Q12366 352 aa8.98□□□□□ -0.97
SOD2YHR008C PFK1P16861 987 aaKnown RBP8.97□□□□□ -0.97
SOD2YHR008C UTH1P36135 365 aa8.97□□□□□ -0.97
SOD2YHR008C UBP13P38187 747 aa8.97□□□□□ -0.97
SOD2YHR008C OCA5P38738 679 aa8.97□□□□□ -0.97
SOD2YHR008C SEC5P89102 971 aa8.97□□□□□ -0.97
SOD2YHR008C YOR296WQ08748 1289 aa8.97□□□□□ -0.97
SOD2YHR008C ASP3-2P0CX77 362 aa8.96□□□□□ -0.98
SOD2YHR008C ASP3-3P0CX78 362 aa8.96□□□□□ -0.98
SOD2YHR008C ASP3-4P0CX79 362 aa8.96□□□□□ -0.98
SOD2YHR008C ASP3-1P0CZ17 362 aa8.96□□□□□ -0.98
SOD2YHR008C KIN3P22209 435 aa8.96□□□□□ -0.98
SOD2YHR008C PUF4P25339 888 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
SOD2YHR008C HXT13P39924 564 aa8.96□□□□□ -0.98
SOD2YHR008C ADY4Q05955 493 aa8.96□□□□□ -0.98
SOD2YHR008C GET3Q12154 354 aaKnown RBP8.96□□□□□ -0.98
SOD2YHR008C ALG1P16661 449 aa8.95□□□□□ -0.98
SOD2YHR008C KDX1P36005 433 aa8.95□□□□□ -0.98
SOD2YHR008C SHE3P38272 425 aaKnown RBP8.95□□□□□ -0.98
SOD2YHR008C LEU5P38702 357 aa8.95□□□□□ -0.98
SOD2YHR008C NUP60P39705 539 aa8.95□□□□□ -0.98
SOD2YHR008C YER158CP40095 573 aa8.95□□□□□ -0.98
SOD2YHR008C OSW5P40219 148 aa8.95□□□□□ -0.98
SOD2YHR008C CEG1Q01159 459 aaPredicted RBP8.95□□□□□ -0.98
SOD2YHR008C WAR1Q03631 944 aa8.95□□□□□ -0.98
SOD2YHR008C SEG1Q04279 960 aa8.95□□□□□ -0.98
SOD2YHR008C OPT2Q06593 877 aa8.95□□□□□ -0.98
SOD2YHR008C GPM2Q12008 311 aa8.95□□□□□ -0.98
SOD2YHR008C REV1P12689 985 aa8.94□□□□□ -0.98
SOD2YHR008C RAM2P29703 316 aa8.94□□□□□ -0.98
SOD2YHR008C TKL2P33315 681 aa8.94□□□□□ -0.98
SOD2YHR008C YBR056WP38081 501 aa8.94□□□□□ -0.98
SOD2YHR008C YIL161WP40449 235 aaKnown RBP8.94□□□□□ -0.98
SOD2YHR008C KRI1P42846 591 aaKnown RBP8.94□□□□□ -0.98
SOD2YHR008C GUP1P53154 560 aa8.94□□□□□ -0.98
SOD2YHR008C TOF1P53840 1238 aa8.94□□□□□ -0.98
SOD2YHR008C RTC4P53850 401 aa8.94□□□□□ -0.98
SOD2YHR008C NBL1Q3E7Y6 73 aa8.94□□□□□ -0.98
SOD2YHR008C STE5P32917 917 aa8.93□□□□□ -0.98
SOD2YHR008C TBS1P38114 1094 aa8.93□□□□□ -0.98
SOD2YHR008C PIK1P39104 1066 aa8.93□□□□□ -0.98
SOD2YHR008C SDS3P40505 327 aa8.93□□□□□ -0.98
SOD2YHR008C YIR007WP40566 764 aa8.93□□□□□ -0.98
SOD2YHR008C PRM6Q04705 352 aa8.93□□□□□ -0.98
SOD2YHR008C YCG1Q06680 1035 aa8.93□□□□□ -0.98
SOD2YHR008C SAP190P36123 1033 aa8.92□□□□□ -0.98
SOD2YHR008C ATG12P38316 186 aa8.92□□□□□ -0.98
SOD2YHR008C PPX1P38698 397 aa8.92□□□□□ -0.98
SOD2YHR008C GDH3P39708 457 aa8.92□□□□□ -0.98
SOD2YHR008C TOF2Q02208 771 aa8.92□□□□□ -0.98
SOD2YHR008C UTP14Q04500 899 aaKnown RBP8.92□□□□□ -0.98
SOD2YHR008C SFP1P32432 683 aa8.91□□□□□ -0.98
SOD2YHR008C ERG10P41338 398 aaKnown RBP8.91□□□□□ -0.98
SOD2YHR008C NPA3P47122 385 aa8.91□□□□□ -0.98
SOD2YHR008C YNR065CP53751 1116 aa8.91□□□□□ -0.98
SOD2YHR008C DCS2Q12123 353 aa8.91□□□□□ -0.98
SOD2YHR008C ISY1P21374 235 aaPredicted RBP8.9□□□□□ -0.98
SOD2YHR008C GUT1P32190 709 aa8.9□□□□□ -0.98
SOD2YHR008C PET10P36139 283 aa8.9□□□□□ -0.98
SOD2YHR008C AGP2P38090 596 aa8.9□□□□□ -0.98
SOD2YHR008C NPP2P39997 493 aa8.9□□□□□ -0.98
SOD2YHR008C SHQ1P40486 507 aaPredicted RBP8.9□□□□□ -0.98
SOD2YHR008C BUD6P41697 788 aa8.9□□□□□ -0.98
SOD2YHR008C THI6P41835 540 aa8.9□□□□□ -0.98
SOD2YHR008C NUP84P52891 726 aa8.9□□□□□ -0.98
SOD2YHR008C TDA7P53882 636 aaPredicted RBP8.9□□□□□ -0.98
SOD2YHR008C GCN5Q03330 439 aa8.9□□□□□ -0.98
SOD2YHR008C EIS1Q05050 843 aaKnown RBP8.9□□□□□ -0.98
SOD2YHR008C HEL2Q05580 639 aaKnown RBP8.9□□□□□ -0.98
SOD2YHR008C FOB1O13329 566 aa8.89□□□□□ -0.99
SOD2YHR008C HSP82P02829 709 aaKnown RBP8.89□□□□□ -0.99
SOD2YHR008C VMA1P17255 1071 aaKnown RBP8.89□□□□□ -0.99
SOD2YHR008C SRX1P36077 127 aa8.89□□□□□ -0.99
SOD2YHR008C YHL017WP38745 532 aa8.89□□□□□ -0.99
SOD2YHR008C VPS70P47161 811 aa8.89□□□□□ -0.99
SOD2YHR008C TRL1P09880 827 aaKnown RBP8.88□□□□□ -0.99
SOD2YHR008C SCJ1P25303 377 aa8.88□□□□□ -0.99
SOD2YHR008C YBR225WP38321 900 aa8.88□□□□□ -0.99
SOD2YHR008C BAT1P38891 393 aaKnown RBP8.88□□□□□ -0.99
SOD2YHR008C SAH1P39954 449 aaKnown RBP8.88□□□□□ -0.99
SOD2YHR008C HSH155P49955 971 aaKnown RBP8.88□□□□□ -0.99
SOD2YHR008C YNL011CP53980 444 aa8.88□□□□□ -0.99
SOD2YHR008C YPL014WQ02606 381 aa8.88□□□□□ -0.99
SOD2YHR008C SMA1Q02651 245 aa8.88□□□□□ -0.99
SOD2YHR008C CHS1P08004 1131 aa8.87□□□□□ -0.99
SOD2YHR008C PHO8P11491 566 aa8.87□□□□□ -0.99
SOD2YHR008C NAT1P12945 854 aaKnown RBP8.87□□□□□ -0.99
SOD2YHR008C CCR4P31384 837 aaKnown RBP8.87□□□□□ -0.99
SOD2YHR008C SNF7P39929 240 aaKnown RBP8.87□□□□□ -0.99
SOD2YHR008C DAS1P47005 663 aa8.87□□□□□ -0.99
SOD2YHR008C UBA2P52488 636 aa8.87□□□□□ -0.99
SOD2YHR008C YPL277CQ08989 487 aa8.87□□□□□ -0.99
SOD2YHR008C YPR027CQ12079 277 aa8.87□□□□□ -0.99
SOD2YHR008C PTC5Q12511 572 aa8.87□□□□□ -0.99
SOD2YHR008C MSF1P08425 469 aa8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms