RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W NFI1Q12216 726 aa4.53□□□□□ -1.68
PTR3YFR029W CPA2P03965 1118 aaKnown RBP4.53□□□□□ -1.68
PTR3YFR029W FUN30P31380 1131 aa4.53□□□□□ -1.68
PTR3YFR029W CNS1P33313 385 aa4.53□□□□□ -1.68
PTR3YFR029W MCD4P36051 919 aa4.53□□□□□ -1.68
PTR3YFR029W MCM7P38132 845 aa4.53□□□□□ -1.68
PTR3YFR029W CCZ1P38273 704 aa4.53□□□□□ -1.68
PTR3YFR029W YBR225WP38321 900 aa4.53□□□□□ -1.68
PTR3YFR029W RTT105P40063 208 aa4.53□□□□□ -1.68
PTR3YFR029W PCL7P40186 285 aa4.53□□□□□ -1.68
PTR3YFR029W POL31P46957 487 aa4.53□□□□□ -1.68
PTR3YFR029W YJR098CP47139 656 aa4.53□□□□□ -1.68
PTR3YFR029W GUP1P53154 560 aa4.53□□□□□ -1.68
PTR3YFR029W TEP1P53916 434 aa4.53□□□□□ -1.68
PTR3YFR029W EAR1Q03212 550 aa4.53□□□□□ -1.68
PTR3YFR029W MFB1Q04922 465 aa4.53□□□□□ -1.68
PTR3YFR029W YLH47Q06493 454 aa4.53□□□□□ -1.68
PTR3YFR029W YMR084WA2P2R3 262 aa4.52□□□□□ -1.69
PTR3YFR029W MET17P06106 444 aa4.52□□□□□ -1.69
PTR3YFR029W HTS1P07263 546 aaKnown RBP4.52□□□□□ -1.69
PTR3YFR029W THR1P17423 357 aaKnown RBP4.52□□□□□ -1.69
PTR3YFR029W DAL80P26343 269 aa4.52□□□□□ -1.69
PTR3YFR029W LAM1P38851 1228 aa4.52□□□□□ -1.69
PTR3YFR029W SLD3P53135 668 aa4.52□□□□□ -1.69
PTR3YFR029W SKY1Q03656 742 aa4.52□□□□□ -1.69
PTR3YFR029W ARV1Q06541 321 aa4.52□□□□□ -1.69
PTR3YFR029W RPS21BQ3E754 87 aaKnown RBP4.52□□□□□ -1.69
PTR3YFR029W DED1P06634 604 aaKnown RBP4.51□□□□□ -1.69
PTR3YFR029W CDC16P09798 840 aa4.51□□□□□ -1.69
PTR3YFR029W RNA1P11745 407 aaKnown RBP4.51□□□□□ -1.69
PTR3YFR029W VMA2P16140 517 aaKnown RBP4.51□□□□□ -1.69
PTR3YFR029W RRP7P25368 297 aaPredicted RBP4.51□□□□□ -1.69
PTR3YFR029W POT1P27796 417 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
PTR3YFR029W DLD1P32891 587 aa4.51□□□□□ -1.69
PTR3YFR029W SEG2P34250 1132 aa4.51□□□□□ -1.69
PTR3YFR029W ADD66P36040 267 aa4.51□□□□□ -1.69
PTR3YFR029W YLF2P38746 405 aa4.51□□□□□ -1.69
PTR3YFR029W MEF2P39677 819 aa4.51□□□□□ -1.69
PTR3YFR029W YTA6P40328 754 aa4.51□□□□□ -1.69
PTR3YFR029W SLS1P42900 643 aa4.51□□□□□ -1.69
PTR3YFR029W YGR153WP48238 217 aa4.51□□□□□ -1.69
PTR3YFR029W PPT1P53043 513 aa4.51□□□□□ -1.69
PTR3YFR029W YGR283CP53336 341 aaPredicted RBP4.51□□□□□ -1.69
PTR3YFR029W BIO5P53744 561 aaKnown RBP4.51□□□□□ -1.69
PTR3YFR029W VID22Q05934 901 aa4.51□□□□□ -1.69
PTR3YFR029W RSC3Q06639 885 aa4.51□□□□□ -1.69
PTR3YFR029W SEM1O94742 89 aa4.51□□□□□ -1.69
PTR3YFR029W STF1P01098 86 aa4.51□□□□□ -1.69
PTR3YFR029W HOP1P20050 605 aa4.51□□□□□ -1.69
PTR3YFR029W MNE1P24720 663 aa4.51□□□□□ -1.69
PTR3YFR029W DBP2P24783 546 aaKnown RBP4.51□□□□□ -1.69
PTR3YFR029W FAT1P38225 669 aa4.51□□□□□ -1.69
PTR3YFR029W NAS2P40555 220 aa4.51□□□□□ -1.69
PTR3YFR029W VTC4P47075 721 aa4.51□□□□□ -1.69
PTR3YFR029W YNR065CP53751 1116 aa4.51□□□□□ -1.69
PTR3YFR029W FDC1Q03034 503 aa4.51□□□□□ -1.69
PTR3YFR029W YDR306CQ06640 478 aa4.51□□□□□ -1.69
PTR3YFR029W OMS1Q06668 471 aa4.51□□□□□ -1.69
PTR3YFR029W PLP2Q12017 286 aa4.51□□□□□ -1.69
PTR3YFR029W YPR027CQ12079 277 aa4.51□□□□□ -1.69
PTR3YFR029W ARP7Q12406 477 aa4.51□□□□□ -1.69
PTR3YFR029W NPP1P25353 742 aa4.5□□□□□ -1.69
PTR3YFR029W MSH1P25846 959 aa4.5□□□□□ -1.69
PTR3YFR029W NIP100P33420 868 aa4.5□□□□□ -1.69
PTR3YFR029W DID4P36108 232 aa4.5□□□□□ -1.69
PTR3YFR029W IFA38P38286 347 aa4.5□□□□□ -1.69
PTR3YFR029W SHU2P38957 223 aa4.5□□□□□ -1.69
PTR3YFR029W PNT1P38969 423 aa4.5□□□□□ -1.69
PTR3YFR029W RAD26P40352 1085 aa4.5□□□□□ -1.69
PTR3YFR029W YJL068CP40363 299 aa4.5□□□□□ -1.69
PTR3YFR029W SMK1P41808 388 aa4.5□□□□□ -1.69
PTR3YFR029W ATP25Q03153 612 aa4.5□□□□□ -1.69
PTR3YFR029W SPP382Q06411 708 aaPredicted RBP4.5□□□□□ -1.69
PTR3YFR029W PAR32Q12515 295 aaKnown RBP4.5□□□□□ -1.69
PTR3YFR029W SAC3P46674 1301 aa4.5□□□□□ -1.69
PTR3YFR029W SES1P07284 462 aaKnown RBP4.5□□□□□ -1.69
PTR3YFR029W PMS1P14242 873 aa4.5□□□□□ -1.69
PTR3YFR029W CKA1P15790 372 aa4.5□□□□□ -1.69
PTR3YFR029W HNM1P19807 563 aa4.5□□□□□ -1.69
PTR3YFR029W HOG1P32485 435 aa4.5□□□□□ -1.69
PTR3YFR029W SLC1P33333 303 aa4.5□□□□□ -1.69
PTR3YFR029W EMP65P40085 556 aa4.5□□□□□ -1.69
PTR3YFR029W TOK1P40310 691 aa4.5□□□□□ -1.69
PTR3YFR029W INP51P40559 946 aaKnown RBP4.5□□□□□ -1.69
PTR3YFR029W YJR124CP47159 448 aa4.5□□□□□ -1.69
PTR3YFR029W ASK10P48361 1146 aa4.5□□□□□ -1.69
PTR3YFR029W SEC5P89102 971 aa4.5□□□□□ -1.69
PTR3YFR029W PTA1Q01329 785 aaPredicted RBP4.5□□□□□ -1.69
PTR3YFR029W RKM2Q03942 479 aa4.5□□□□□ -1.69
PTR3YFR029W COG8Q04632 607 aa4.5□□□□□ -1.69
PTR3YFR029W MDM38Q08179 573 aa4.5□□□□□ -1.69
PTR3YFR029W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
PTR3YFR029W GNT1Q12096 491 aa4.5□□□□□ -1.69
PTR3YFR029W MTF2P10849 440 aa4.49□□□□□ -1.69
PTR3YFR029W OLE1P21147 510 aaKnown RBP4.49□□□□□ -1.69
PTR3YFR029W ROX1P25042 368 aa4.49□□□□□ -1.69
PTR3YFR029W SED4P25365 1065 aa4.49□□□□□ -1.69
PTR3YFR029W ADP1P25371 1049 aa4.49□□□□□ -1.69
PTR3YFR029W DBF4P32325 704 aa4.49□□□□□ -1.69
PTR3YFR029W ATG19P35193 415 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms