RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W SEC21P32074 935 aaKnown RBP8.29□□□□□ -1.08
LCP5YER127W MNN4P36044 1178 aa8.29□□□□□ -1.08
LCP5YER127W AVT1P47082 602 aa8.29□□□□□ -1.08
LCP5YER127W YJR120WP47157 116 aa8.29□□□□□ -1.08
LCP5YER127W YGR153WP48238 217 aa8.29□□□□□ -1.08
LCP5YER127W KCS1Q12494 1050 aa8.29□□□□□ -1.08
LCP5YER127W PAN1P32521 1480 aa8.28□□□□□ -1.08
LCP5YER127W CAD1P24813 409 aaKnown RBP8.28□□□□□ -1.08
LCP5YER127W RNQ1P25367 405 aa8.28□□□□□ -1.08
LCP5YER127W YKR018CP36114 725 aa8.28□□□□□ -1.08
LCP5YER127W GZF3P42944 551 aaKnown RBP8.28□□□□□ -1.08
LCP5YER127W PKH1Q03407 766 aa8.28□□□□□ -1.08
LCP5YER127W ASM4Q05166 528 aa8.28□□□□□ -1.08
LCP5YER127W PEX19Q07418 342 aa8.28□□□□□ -1.08
LCP5YER127W MRC1P25588 1096 aa8.27□□□□□ -1.09
LCP5YER127W EUG1P32474 517 aa8.27□□□□□ -1.09
LCP5YER127W OAF1P39720 1047 aaPredicted RBP8.27□□□□□ -1.09
LCP5YER127W NIT1P40447 199 aa8.27□□□□□ -1.09
LCP5YER127W PFA3P42836 336 aa8.27□□□□□ -1.09
LCP5YER127W RET2P43621 546 aa8.27□□□□□ -1.09
LCP5YER127W ORC4P54791 529 aa8.27□□□□□ -1.09
LCP5YER127W NGG1P32494 702 aa8.26□□□□□ -1.09
LCP5YER127W PAF1P38351 445 aa8.26□□□□□ -1.09
LCP5YER127W BFA1P47113 574 aa8.26□□□□□ -1.09
LCP5YER127W PCL10P53124 433 aa8.26□□□□□ -1.09
LCP5YER127W ASI2P53895 289 aa8.26□□□□□ -1.09
LCP5YER127W TOP2P06786 1428 aaKnown RBP8.26□□□□□ -1.09
LCP5YER127W PRP6P19735 899 aaPredicted RBP8.25□□□□□ -1.09
LCP5YER127W YBP2P53169 641 aa8.25□□□□□ -1.09
LCP5YER127W TRE2Q08693 809 aa8.25□□□□□ -1.09
LCP5YER127W ESC1Q03661 1658 aaKnown RBP8.24□□□□□ -1.09
LCP5YER127W TUB3P09734 445 aaKnown RBP8.24□□□□□ -1.09
LCP5YER127W MIP6P38760 659 aaKnown RBP8.24□□□□□ -1.09
LCP5YER127W TMA10Q06177 86 aa8.24□□□□□ -1.09
LCP5YER127W KAR4P25583 335 aa8.23□□□□□ -1.09
LCP5YER127W LST4P34239 828 aa8.23□□□□□ -1.09
LCP5YER127W MNN11P46985 422 aaKnown RBP8.23□□□□□ -1.09
LCP5YER127W ECM9Q02202 377 aa8.23□□□□□ -1.09
LCP5YER127W DNF1P32660 1571 aa8.22□□□□□ -1.09
LCP5YER127W RKR1Q04781 1562 aa8.22□□□□□ -1.09
LCP5YER127W YLR358CO13565 187 aa8.22□□□□□ -1.09
LCP5YER127W PRP4P20053 465 aaKnown RBP8.22□□□□□ -1.09
LCP5YER127W GRX7P38068 203 aa8.22□□□□□ -1.09
LCP5YER127W MAL31P38156 614 aa8.22□□□□□ -1.09
LCP5YER127W YBR071WP38243 211 aa8.22□□□□□ -1.09
LCP5YER127W CCT5P40413 562 aaKnown RBP8.22□□□□□ -1.09
LCP5YER127W ARP4P80428 489 aa8.22□□□□□ -1.09
LCP5YER127W GPD1Q00055 391 aaKnown RBP8.22□□□□□ -1.09
LCP5YER127W YLR415CO13578 112 aa8.21□□□□□ -1.1
LCP5YER127W PRE10P21242 288 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
LCP5YER127W DID4P36108 232 aa8.21□□□□□ -1.1
LCP5YER127W YKR075CP36155 307 aa8.21□□□□□ -1.1
LCP5YER127W SLU7Q02775 382 aaKnown RBP8.21□□□□□ -1.1
LCP5YER127W RGA2Q06407 1009 aa8.21□□□□□ -1.1
LCP5YER127W GPR1Q12361 961 aa8.21□□□□□ -1.1
LCP5YER127W TRM732Q03496 1420 aa8.2□□□□□ -1.1
LCP5YER127W GEA2P39993 1459 aaKnown RBP8.2□□□□□ -1.1
LCP5YER127W RPP1P38786 293 aa8.2□□□□□ -1.1
LCP5YER127W MCM6P53091 1017 aaKnown RBP8.2□□□□□ -1.1
LCP5YER127W YHM2Q04013 314 aa8.2□□□□□ -1.1
LCP5YER127W DCS2Q12123 353 aa8.2□□□□□ -1.1
LCP5YER127W TY2B-LR1P0C2J3 1770 aa8.2□□□□□ -1.1
LCP5YER127W TY2B-FP0CX63 1770 aa8.2□□□□□ -1.1
LCP5YER127W TY2B-GR2P0CX64 1770 aa8.2□□□□□ -1.1
LCP5YER127W TY2B-CP25384 1770 aa8.2□□□□□ -1.1
LCP5YER127W TY2B-DR2Q03494 1770 aa8.2□□□□□ -1.1
LCP5YER127W TY1B-DR1Q03855 1755 aa8.2□□□□□ -1.1
LCP5YER127W TY2B-DR3Q07791 1770 aaKnown RBP8.2□□□□□ -1.1
LCP5YER127W TY2B-OR1Q12113 1770 aa8.2□□□□□ -1.1
LCP5YER127W TY2B-DR1Q12472 1770 aa8.2□□□□□ -1.1
LCP5YER127W TY2B-OR2Q12501 1770 aa8.2□□□□□ -1.1
LCP5YER127W MMS22Q06164 1454 aa8.19□□□□□ -1.1
LCP5YER127W DUG1P43616 481 aaKnown RBP8.19□□□□□ -1.1
LCP5YER127W PRP31P49704 494 aaPredicted RBP8.19□□□□□ -1.1
LCP5YER127W COG6P53959 839 aa8.19□□□□□ -1.1
LCP5YER127W TRM11Q12463 433 aa8.19□□□□□ -1.1
LCP5YER127W DAL3P32459 195 aa8.18□□□□□ -1.1
LCP5YER127W SSZ1P38788 538 aaKnown RBP8.18□□□□□ -1.1
LCP5YER127W YJR008WP47085 338 aa8.18□□□□□ -1.1
LCP5YER127W EXG2P52911 562 aa8.18□□□□□ -1.1
LCP5YER127W NRD1P53617 575 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
LCP5YER127W BRE5P53741 515 aaKnown RBP8.18□□□□□ -1.1
LCP5YER127W LEE1Q02799 301 aaKnown RBP8.18□□□□□ -1.1
LCP5YER127W RPS21BQ3E754 87 aaKnown RBP8.18□□□□□ -1.1
LCP5YER127W RPA190P10964 1664 aaKnown RBP8.18□□□□□ -1.1
LCP5YER127W TY1B-BRQ12193 1756 aa8.17□□□□□ -1.1
LCP5YER127W TY1B-GR3Q12316 1755 aa8.17□□□□□ -1.1
LCP5YER127W TY1B-ORQ92393 1755 aa8.17□□□□□ -1.1
LCP5YER127W THI80P35202 319 aa8.17□□□□□ -1.1
LCP5YER127W CTF13P35203 478 aa8.17□□□□□ -1.1
LCP5YER127W YJR039WP47107 1121 aa8.17□□□□□ -1.1
LCP5YER127W PTA1Q01329 785 aaPredicted RBP8.17□□□□□ -1.1
LCP5YER127W NRG1Q03125 231 aa8.17□□□□□ -1.1
LCP5YER127W RMP1Q12530 201 aa8.17□□□□□ -1.1
LCP5YER127W AEP2P22136 580 aa8.16□□□□□ -1.1
LCP5YER127W ELM1P32801 640 aa8.16□□□□□ -1.1
LCP5YER127W YBR259WP38338 688 aa8.16□□□□□ -1.1
LCP5YER127W YHR202WP38887 602 aa8.16□□□□□ -1.1
LCP5YER127W HXT6P39003 570 aaKnown RBP8.16□□□□□ -1.1
LCP5YER127W HXT7P39004 570 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms