RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W HSP78P33416 811 aa2.39□□□□□ -2.03
VPS8YAL002W GZF3P42944 551 aaKnown RBP2.39□□□□□ -2.03
VPS8YAL002W NOG2P53742 486 aaKnown RBP2.39□□□□□ -2.03
VPS8YAL002W GIS4Q04233 774 aa2.39□□□□□ -2.03
VPS8YAL002W RTP1Q12751 981 aa2.39□□□□□ -2.03
VPS8YAL002W GPM1P00950 247 aaKnown RBP2.38□□□□□ -2.03
VPS8YAL002W URA1P28272 314 aaPredicted RBP2.38□□□□□ -2.03
VPS8YAL002W SMY2P32909 740 aaKnown RBP2.38□□□□□ -2.03
VPS8YAL002W MTR3P48240 250 aaPredicted RBP2.38□□□□□ -2.03
VPS8YAL002W GTF1P53260 183 aaPredicted RBP2.38□□□□□ -2.03
VPS8YAL002W MLC2Q06580 163 aa2.38□□□□□ -2.03
VPS8YAL002W PIF1P07271 859 aa2.38□□□□□ -2.03
VPS8YAL002W RAD16P31244 790 aa2.38□□□□□ -2.03
VPS8YAL002W YKR051WP36142 418 aa2.38□□□□□ -2.03
VPS8YAL002W BIT2P38346 545 aa2.38□□□□□ -2.03
VPS8YAL002W PCM1P38628 557 aaKnown RBP2.38□□□□□ -2.03
VPS8YAL002W MDM38Q08179 573 aa2.38□□□□□ -2.03
VPS8YAL002W IQG1Q12280 1495 aa2.38□□□□□ -2.03
VPS8YAL002W PFK2P16862 959 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
VPS8YAL002W TRK2P28584 889 aa2.38□□□□□ -2.03
VPS8YAL002W DBF20P32328 564 aa2.38□□□□□ -2.03
VPS8YAL002W SER1P33330 395 aaKnown RBP2.38□□□□□ -2.03
VPS8YAL002W MDJ1P35191 511 aa2.38□□□□□ -2.03
VPS8YAL002W MCD4P36051 919 aa2.38□□□□□ -2.03
VPS8YAL002W ARL1P38116 183 aaKnown RBP2.38□□□□□ -2.03
VPS8YAL002W EXO84P38261 753 aa2.38□□□□□ -2.03
VPS8YAL002W FAF1P40546 346 aaPredicted RBP2.38□□□□□ -2.03
VPS8YAL002W HOL1P53389 586 aa2.38□□□□□ -2.03
VPS8YAL002W SQS1P53866 767 aaKnown RBP2.38□□□□□ -2.03
VPS8YAL002W GTR1Q00582 310 aa2.38□□□□□ -2.03
VPS8YAL002W YDR338CQ05497 695 aa2.38□□□□□ -2.03
VPS8YAL002W RPS21BQ3E754 87 aaKnown RBP2.38□□□□□ -2.03
VPS8YAL002W ULS1Q08562 1619 aa2.37□□□□□ -2.03
VPS8YAL002W PTC7P38797 343 aa2.37□□□□□ -2.03
VPS8YAL002W MPP10P47083 593 aaKnown RBP2.37□□□□□ -2.03
VPS8YAL002W GPD1Q00055 391 aaKnown RBP2.37□□□□□ -2.03
VPS8YAL002W SRT1Q03175 343 aa2.37□□□□□ -2.03
VPS8YAL002W YMR210WQ03649 449 aa2.37□□□□□ -2.03
VPS8YAL002W OMS1Q06668 471 aa2.37□□□□□ -2.03
VPS8YAL002W CMP2P14747 604 aa2.37□□□□□ -2.03
VPS8YAL002W FUN30P31380 1131 aa2.37□□□□□ -2.03
VPS8YAL002W MET22P32179 357 aa2.37□□□□□ -2.03
VPS8YAL002W DGR2P32330 852 aa2.37□□□□□ -2.03
VPS8YAL002W SLC1P33333 303 aa2.37□□□□□ -2.03
VPS8YAL002W TSL1P38427 1098 aaKnown RBP2.37□□□□□ -2.03
VPS8YAL002W YHR033WP38690 423 aa2.37□□□□□ -2.03
VPS8YAL002W ERR3P42222 437 aa2.37□□□□□ -2.03
VPS8YAL002W SBE2P42223 864 aaKnown RBP2.37□□□□□ -2.03
VPS8YAL002W PSP2P50109 593 aaKnown RBP2.37□□□□□ -2.03
VPS8YAL002W DSE4P53753 1117 aa2.37□□□□□ -2.03
VPS8YAL002W BLS1Q06071 122 aa2.37□□□□□ -2.03
VPS8YAL002W YDR461C-AQ2V2P7 80 aa2.37□□□□□ -2.03
VPS8YAL002W RPS9BP05755 195 aaKnown RBP2.37□□□□□ -2.03
VPS8YAL002W RPS21AP0C0V8 87 aaKnown RBP2.37□□□□□ -2.03
VPS8YAL002W SEC15P22224 910 aa2.37□□□□□ -2.03
VPS8YAL002W CHS3P29465 1165 aa2.37□□□□□ -2.03
VPS8YAL002W DID4P36108 232 aa2.37□□□□□ -2.03
VPS8YAL002W YIL092WP40497 633 aa2.37□□□□□ -2.03
VPS8YAL002W RET2P43621 546 aa2.37□□□□□ -2.03
VPS8YAL002W SRB7P47822 140 aa2.37□□□□□ -2.03
VPS8YAL002W MDM1Q01846 1127 aa2.37□□□□□ -2.03
VPS8YAL002W SYT1Q06836 1226 aa2.37□□□□□ -2.03
VPS8YAL002W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VPS8YAL002W SNU66Q12420 587 aaPredicted RBP2.37□□□□□ -2.03
VPS8YAL002W SLA2P33338 968 aa2.36□□□□□ -2.03
VPS8YAL002W MAL31P38156 614 aa2.36□□□□□ -2.03
VPS8YAL002W UME6P39001 836 aa2.36□□□□□ -2.03
VPS8YAL002W MGS1P40151 587 aa2.36□□□□□ -2.03
VPS8YAL002W MNN11P46985 422 aaKnown RBP2.36□□□□□ -2.03
VPS8YAL002W YBP2P53169 641 aa2.36□□□□□ -2.03
VPS8YAL002W EAR1Q03212 550 aa2.36□□□□□ -2.03
VPS8YAL002W RSM24Q03976 319 aa2.36□□□□□ -2.03
VPS8YAL002W ISA1Q07821 250 aaPredicted RBP2.36□□□□□ -2.03
VPS8YAL002W CWC2Q12046 339 aaPredicted RBP2.36□□□□□ -2.03
VPS8YAL002W VMR1P38735 1592 aa2.36□□□□□ -2.03
VPS8YAL002W KIN2P13186 1147 aaKnown RBP2.36□□□□□ -2.03
VPS8YAL002W GLN4P13188 809 aaKnown RBP2.36□□□□□ -2.03
VPS8YAL002W DAL5P15365 543 aa2.36□□□□□ -2.03
VPS8YAL002W RSC6P25632 483 aa2.36□□□□□ -2.03
VPS8YAL002W BEM3P32873 1128 aa2.36□□□□□ -2.03
VPS8YAL002W TYE7P33122 291 aaPredicted RBP2.36□□□□□ -2.03
VPS8YAL002W SIT1P39980 628 aa2.36□□□□□ -2.03
VPS8YAL002W ZRG8P40021 1076 aa2.36□□□□□ -2.03
VPS8YAL002W MNT3P40549 630 aa2.36□□□□□ -2.03
VPS8YAL002W CAF16P43569 289 aa2.36□□□□□ -2.03
VPS8YAL002W PRY1P47032 299 aa2.36□□□□□ -2.03
VPS8YAL002W ASK10P48361 1146 aa2.36□□□□□ -2.03
VPS8YAL002W SKY1Q03656 742 aa2.36□□□□□ -2.03
VPS8YAL002W XYL2Q07993 356 aa2.36□□□□□ -2.03
VPS8YAL002W YOR059CQ08448 450 aaKnown RBP2.36□□□□□ -2.03
VPS8YAL002W SNQ2P32568 1501 aaKnown RBP2.36□□□□□ -2.03
VPS8YAL002W TY4B-PA0A0B7P3V8 1104 aa2.36□□□□□ -2.03
VPS8YAL002W SPS1P08458 490 aa2.36□□□□□ -2.03
VPS8YAL002W OPI1P21957 404 aa2.36□□□□□ -2.03
VPS8YAL002W YEL068CP39977 110 aa2.36□□□□□ -2.03
VPS8YAL002W TMA108P40462 946 aa2.36□□□□□ -2.03
VPS8YAL002W SAP185P40856 1058 aa2.36□□□□□ -2.03
VPS8YAL002W LYS5P50113 272 aa2.36□□□□□ -2.03
VPS8YAL002W RAI1P53063 387 aaKnown RBP2.36□□□□□ -2.03
VPS8YAL002W ORC4P54791 529 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms