RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 SIK1P57059 783 aa9.47□□□□□ -0.89
CASC19-261ENST00000641853 COL9A3Q14050 684 aaPredicted RBP9.47□□□□□ -0.89
CASC19-261ENST00000641853 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
CASC19-261ENST00000641853 NUDT8Q8WV74 236 aa9.47□□□□□ -0.89
CASC19-261ENST00000641853 LPIN3Q9BQK8 851 aa9.47□□□□□ -0.89
CASC19-261ENST00000641853 RBCK1Q9BYM8 510 aa9.47□□□□□ -0.89
CASC19-261ENST00000641853 KANSL3Q9P2N6 904 aa9.47□□□□□ -0.89
CASC19-261ENST00000641853 PCSK7Q16549 785 aa9.46□□□□□ -0.89
CASC19-261ENST00000641853 DCTN4Q9UJW0 460 aa9.46□□□□□ -0.89
CASC19-261ENST00000641853 KIF4AO95239 1232 aa9.45□□□□□ -0.9
CASC19-261ENST00000641853 EIF2AK2P19525 551 aaKnown RBP9.45□□□□□ -0.9
CASC19-261ENST00000641853 TMC7Q7Z402 723 aa9.45□□□□□ -0.9
CASC19-261ENST00000641853 CITED4Q96RK1 184 aa9.45□□□□□ -0.9
CASC19-261ENST00000641853 EREGO14944 169 aa9.44□□□□□ -0.9
CASC19-261ENST00000641853 CES1P23141 567 aa9.44□□□□□ -0.9
CASC19-261ENST00000641853 HYAL2Q12891 473 aa9.44□□□□□ -0.9
CASC19-261ENST00000641853 SND1Q7KZF4 910 aaKnown RBP eCLIP9.44□□□□□ -0.9
CASC19-261ENST00000641853 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
CASC19-261ENST00000641853 TRIM11Q96F44 468 aa9.44□□□□□ -0.9
CASC19-261ENST00000641853 PHF20L1A8MW92 1017 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 PHACTR2O75167 634 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 MAPK1P28482 360 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 PDE3BQ13370 1112 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 ORC1Q13415 861 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 GRIK5Q16478 980 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 ELMSAN1Q6PJG2 1045 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 BEND7Q8N7W2 519 aaPredicted RBP9.43□□□□□ -0.9
CASC19-261ENST00000641853 TMC1Q8TDI8 760 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 SMG9Q9H0W8 520 aaKnown RBP9.43□□□□□ -0.9
CASC19-261ENST00000641853 SUV39H2Q9H5I1 410 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 JPH1Q9HDC5 661 aaPredicted RBP9.43□□□□□ -0.9
CASC19-261ENST00000641853 PRDM6Q9NQX0 595 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 SALL4Q9UJQ4 1053 aa9.43□□□□□ -0.9
CASC19-261ENST00000641853 ACPPP15309 386 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 GSK3AP49840 483 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 AFF1P51825 1210 aaKnown RBP9.42□□□□□ -0.9
CASC19-261ENST00000641853 CEP120Q8N960 986 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 PLD4Q96BZ4 506 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 SCARF2Q96GP6 870 aaPredicted RBP9.42□□□□□ -0.9
CASC19-261ENST00000641853 ZFYVE28Q9HCC9 887 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 MKL2Q9ULH7 1088 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 RGS9O75916 674 aaPredicted RBP9.42□□□□□ -0.9
CASC19-261ENST00000641853 NID1P14543 1247 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 ATP11AP98196 1134 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 USPL1Q5W0Q7 1092 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 NIF3L1Q9GZT8 377 aa9.42□□□□□ -0.9
CASC19-261ENST00000641853 GZF1Q9H116 711 aaPredicted RBP9.42□□□□□ -0.9
CASC19-261ENST00000641853 LILRB5O75023 590 aa9.41□□□□□ -0.9
CASC19-261ENST00000641853 ADAMTSL4Q6UY14 1074 aa9.41□□□□□ -0.9
CASC19-261ENST00000641853 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
CASC19-261ENST00000641853 NCAPG2Q86XI2 1143 aa9.41□□□□□ -0.9
CASC19-261ENST00000641853 GNB5O14775 395 aa9.4□□□□□ -0.9
CASC19-261ENST00000641853 GHRHP01286 108 aa9.4□□□□□ -0.9
CASC19-261ENST00000641853 POLR3DP05423 398 aaPredicted RBP9.4□□□□□ -0.9
CASC19-261ENST00000641853 IRS1P35568 1242 aa9.4□□□□□ -0.9
CASC19-261ENST00000641853 RASSF4Q9H2L5 321 aa9.4□□□□□ -0.9
CASC19-261ENST00000641853 COL8A1P27658 744 aa9.39□□□□□ -0.91
CASC19-261ENST00000641853 TTC9Q92623 222 aa9.39□□□□□ -0.91
CASC19-261ENST00000641853 DMRTB1Q96MA1 342 aa9.39□□□□□ -0.91
CASC19-261ENST00000641853 TRPA1O75762 1119 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 DSC3Q14574 896 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 PMEPA1Q969W9 287 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 ALKBH8Q96BT7 664 aaKnown RBP9.38□□□□□ -0.91
CASC19-261ENST00000641853 PLVAPQ9BX97 442 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 TRIM33Q9UPN9 1127 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 NFKBIEO00221 500 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 PEAR1Q5VY43 1037 aaPredicted RBP9.38□□□□□ -0.91
CASC19-261ENST00000641853 SPACA7Q96KW9 195 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 HHIPQ96QV1 700 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 AMOTL2Q9Y2J4 779 aa9.38□□□□□ -0.91
CASC19-261ENST00000641853 EIF1AYO14602 144 aaKnown RBP9.37□□□□□ -0.91
CASC19-261ENST00000641853 TREHO43280 583 aa9.37□□□□□ -0.91
CASC19-261ENST00000641853 PBX4Q9BYU1 374 aa9.37□□□□□ -0.91
CASC19-261ENST00000641853 DZANK1Q9NVP4 752 aa9.37□□□□□ -0.91
CASC19-261ENST00000641853 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
CASC19-261ENST00000641853 BAG6P46379 1132 aa9.35□□□□□ -0.91
CASC19-261ENST00000641853 KCNMA1Q12791 1236 aa9.35□□□□□ -0.91
CASC19-261ENST00000641853 CEP135Q66GS9 1140 aa9.35□□□□□ -0.91
CASC19-261ENST00000641853 GDF6Q6KF10 455 aaPredicted RBP9.35□□□□□ -0.91
CASC19-261ENST00000641853 POP1Q99575 1024 aaKnown RBP9.35□□□□□ -0.91
CASC19-261ENST00000641853 ZKSCAN3Q9BRR0 538 aa9.35□□□□□ -0.91
CASC19-261ENST00000641853 CPNE3O75131 537 aaKnown RBP9.34□□□□□ -0.91
CASC19-261ENST00000641853 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
CASC19-261ENST00000641853 EDN3P14138 238 aa9.34□□□□□ -0.91
CASC19-261ENST00000641853 RASSF7Q02833 373 aa9.34□□□□□ -0.91
CASC19-261ENST00000641853 MSL1Q68DK7 614 aa9.34□□□□□ -0.91
CASC19-261ENST00000641853 ZSCAN29Q8IWY8 852 aaPredicted RBP9.34□□□□□ -0.91
CASC19-261ENST00000641853 GALNT12Q8IXK2 581 aa9.34□□□□□ -0.91
CASC19-261ENST00000641853 CSRNP1Q96S65 589 aa9.34□□□□□ -0.91
CASC19-261ENST00000641853 OSMRQ99650 979 aa9.34□□□□□ -0.91
CASC19-261ENST00000641853 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
CASC19-261ENST00000641853 NEFLP07196 543 aa9.33□□□□□ -0.92
CASC19-261ENST00000641853 PLCB3Q01970 1234 aa9.33□□□□□ -0.92
CASC19-261ENST00000641853 DMRTC2Q8IXT2 367 aaPredicted RBP9.33□□□□□ -0.92
CASC19-261ENST00000641853 SMNDC1O75940 238 aaKnown RBP eCLIP9.32□□□□□ -0.92
CASC19-261ENST00000641853 FMR1Q06787 632 aaKnown RBP eCLIP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms