RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 PDRG1Q9NUG6 133 aa18.44■□□□□ 0.54
SPIN3-242ENST00000640577 LIMCH1Q9UPQ0 1083 aa18.44■□□□□ 0.54
SPIN3-242ENST00000640577 CICQ96RK0 1608 aaPredicted RBP18.44■□□□□ 0.54
SPIN3-242ENST00000640577 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
SPIN3-242ENST00000640577 CAMTA2O94983 1202 aa18.44■□□□□ 0.54
SPIN3-242ENST00000640577 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
SPIN3-242ENST00000640577 TCEANC2Q96MN5 208 aa18.44■□□□□ 0.54
SPIN3-242ENST00000640577 CYP46A1Q9Y6A2 500 aa18.44■□□□□ 0.54
SPIN3-242ENST00000640577 MCMDC2Q4G0Z9 681 aa18.43■□□□□ 0.54
SPIN3-242ENST00000640577 VPS53Q5VIR6 699 aa18.43■□□□□ 0.54
SPIN3-242ENST00000640577 USPL1Q5W0Q7 1092 aa18.43■□□□□ 0.54
SPIN3-242ENST00000640577 LDHAL6AQ6ZMR3 332 aa18.43■□□□□ 0.54
SPIN3-242ENST00000640577 FBXO3Q9UK99 471 aa18.43■□□□□ 0.54
SPIN3-242ENST00000640577 BRD1O95696 1058 aa18.43■□□□□ 0.54
SPIN3-242ENST00000640577 HCLS1P14317 486 aaPredicted RBP18.43■□□□□ 0.54
SPIN3-242ENST00000640577 PI16Q6UXB8 463 aa18.43■□□□□ 0.54
SPIN3-242ENST00000640577 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
SPIN3-242ENST00000640577 VPS72Q15906 364 aa18.42■□□□□ 0.54
SPIN3-242ENST00000640577 AKAP11Q9UKA4 1901 aa18.42■□□□□ 0.54
SPIN3-242ENST00000640577 PDE8AO60658 829 aa18.42■□□□□ 0.54
SPIN3-242ENST00000640577 VGLL2Q8N8G2 317 aa18.42■□□□□ 0.54
SPIN3-242ENST00000640577 SH3TC1Q8TE82 1336 aa18.42■□□□□ 0.54
SPIN3-242ENST00000640577 ANKRD18BA2A2Z9 1011 aa18.41■□□□□ 0.54
SPIN3-242ENST00000640577 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
SPIN3-242ENST00000640577 METTL24Q5JXM2 366 aa18.41■□□□□ 0.54
SPIN3-242ENST00000640577 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
SPIN3-242ENST00000640577 LMBRD1Q9NUN5 540 aa18.41■□□□□ 0.54
SPIN3-242ENST00000640577 SPEF2Q9C093 1822 aa18.41■□□□□ 0.54
SPIN3-242ENST00000640577 DDX60Q8IY21 1712 aaKnown RBP18.41■□□□□ 0.54
SPIN3-242ENST00000640577 TCHHQ07283 1943 aa18.41■□□□□ 0.54
SPIN3-242ENST00000640577 RTN4Q9NQC3 1192 aaKnown RBP18.41■□□□□ 0.54
SPIN3-242ENST00000640577 AKAP2Q9Y2D5 859 aa18.41■□□□□ 0.54
SPIN3-242ENST00000640577 MYO5AQ9Y4I1 1855 aaKnown RBP18.41■□□□□ 0.54
SPIN3-242ENST00000640577 EP400Q96L91 3159 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 ME3Q16798 604 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 A0A0G2JLW4 131 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 FAM182BQ5T319 152 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 GORABQ5T7V8 394 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 CNNM1Q9NRU3 951 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 TPCN1Q9ULQ1 816 aa18.4■□□□□ 0.54
SPIN3-242ENST00000640577 LAMA4Q16363 1823 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 CYP21A2P08686 494 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 TSGA10IPQ3SY00 556 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 TTC39AQ5SRH9 613 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 FNBP4Q8N3X1 1017 aaPredicted RBP18.39■□□□□ 0.53
SPIN3-242ENST00000640577 FSD2A1L4K1 749 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 RNF20Q5VTR2 975 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 CCDC83Q8IWF9 413 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 NECAB1Q8N987 351 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
SPIN3-242ENST00000640577 MAST3O60307 1309 aa18.39■□□□□ 0.53
SPIN3-242ENST00000640577 COL4A1P02462 1669 aa18.38■□□□□ 0.53
SPIN3-242ENST00000640577 GOLGA6L22H0YM25 854 aa18.38■□□□□ 0.53
SPIN3-242ENST00000640577 ZAP70P43403 619 aa18.38■□□□□ 0.53
SPIN3-242ENST00000640577 HELBQ8NG08 1087 aaPredicted RBP18.38■□□□□ 0.53
SPIN3-242ENST00000640577 SEC31BQ9NQW1 1179 aa18.38■□□□□ 0.53
SPIN3-242ENST00000640577 LRP5O75197 1615 aa18.38■□□□□ 0.53
SPIN3-242ENST00000640577 M0R2C6 588 aa18.38■□□□□ 0.53
SPIN3-242ENST00000640577 RNF113AO15541 343 aaKnown RBP18.38■□□□□ 0.53
SPIN3-242ENST00000640577 RPS6KB1P23443 525 aa18.38■□□□□ 0.53
SPIN3-242ENST00000640577 HMG20BQ9P0W2 317 aa18.38■□□□□ 0.53
SPIN3-242ENST00000640577 SNAP23O00161 211 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 PRPF40AO75400 957 aaKnown RBP18.37■□□□□ 0.53
SPIN3-242ENST00000640577 PSMA5P28066 241 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
SPIN3-242ENST00000640577 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
SPIN3-242ENST00000640577 BLOC1S2Q6QNY1 142 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 STOX1Q6ZVD7 989 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 SMARCC1Q92922 1105 aaPredicted RBP18.37■□□□□ 0.53
SPIN3-242ENST00000640577 OSBP2Q969R2 916 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 UTP14AQ9BVJ6 771 aaKnown RBP18.37■□□□□ 0.53
SPIN3-242ENST00000640577 HELLSQ9NRZ9 838 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 NIP7Q9Y221 180 aaKnown RBP eCLIP18.37■□□□□ 0.53
SPIN3-242ENST00000640577 MYH7P12883 1935 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 BCORQ6W2J9 1755 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 NTSR2O95665 410 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 MCAMP43121 646 aa18.37■□□□□ 0.53
SPIN3-242ENST00000640577 FOXD4L6Q3SYB3 417 aaPredicted RBP18.37■□□□□ 0.53
SPIN3-242ENST00000640577 FOXD4L3Q6VB84 417 aaPredicted RBP18.37■□□□□ 0.53
SPIN3-242ENST00000640577 PDE8BO95263 885 aa18.36■□□□□ 0.53
SPIN3-242ENST00000640577 DDX49Q9Y6V7 483 aaKnown RBP18.36■□□□□ 0.53
SPIN3-242ENST00000640577 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
SPIN3-242ENST00000640577 BTAF1O14981 1849 aa18.35■□□□□ 0.53
SPIN3-242ENST00000640577 ZNF831Q5JPB2 1677 aa18.35■□□□□ 0.53
SPIN3-242ENST00000640577 FOXP2O15409 715 aa18.35■□□□□ 0.53
SPIN3-242ENST00000640577 HSPD1P10809 573 aaKnown RBP18.35■□□□□ 0.53
SPIN3-242ENST00000640577 KLHL40Q2TBA0 621 aa18.35■□□□□ 0.53
SPIN3-242ENST00000640577 GAS2L3Q86XJ1 694 aa18.35■□□□□ 0.53
SPIN3-242ENST00000640577 USP21Q9UK80 565 aa18.35■□□□□ 0.53
SPIN3-242ENST00000640577 TAF1P21675 1872 aa18.35■□□□□ 0.53
SPIN3-242ENST00000640577 PTMSP20962 102 aa18.34■□□□□ 0.53
SPIN3-242ENST00000640577 SYT1P21579 422 aa18.34■□□□□ 0.53
SPIN3-242ENST00000640577 GPT2Q8TD30 523 aa18.34■□□□□ 0.53
SPIN3-242ENST00000640577 GJB2P29033 226 aa18.33■□□□□ 0.53
SPIN3-242ENST00000640577 PHKA1P46020 1223 aa18.33■□□□□ 0.53
SPIN3-242ENST00000640577 ZSCAN31Q96LW9 406 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms