RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 KIF4AO95239 1232 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 CCDC181Q5TID7 509 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 CCDC148Q8NFR7 591 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 SMARCC2Q8TAQ2 1214 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 ZNF526Q8TF50 670 aaPredicted RBP10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 SPOUT1Q5T280 376 aaKnown RBP10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 SLC5A4Q9NY91 659 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 NLRP1Q9C000 1473 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 LRRC27Q9C0I9 530 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 SPC25Q9HBM1 224 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 NOC2LQ9Y3T9 749 aaKnown RBP10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 SLC9C2Q5TAH2 1124 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 ERCC4Q92889 916 aaPredicted RBP10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 SH3TC1Q8TE82 1336 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 MCM5P33992 734 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 CETN1Q12798 172 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 FKBP15Q5T1M5 1219 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 TRMT1LQ7Z2T5 733 aaKnown RBP10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 TTC6Q86TZ1 520 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 USP16Q9Y5T5 823 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 ZNF790Q6PG37 636 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 CCDC144CPQ8IYA2 1237 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 NUP62CLQ9H1M0 184 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 SSX2IPQ9Y2D8 614 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 TMEM94Q12767 1356 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 MICU3Q86XE3 530 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 PLBD2Q8NHP8 589 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 PYM1Q9BRP8 204 aaKnown RBP10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 BCS1LQ9Y276 419 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 BICD1Q96G01 975 aa10.78□□□□□ -0.68
CACNA1D-230ENST00000640483 MCM9Q9NXL9 1143 aa10.77□□□□□ -0.68
CACNA1D-230ENST00000640483 ABT1Q9ULW3 272 aaKnown RBP10.77□□□□□ -0.68
CACNA1D-230ENST00000640483 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 CCT2P78371 535 aaKnown RBP10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 SETQ01105 290 aaPredicted RBP10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 NEK1Q96PY6 1258 aa10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 SLC52A2Q9HAB3 445 aa10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 APBB1IPQ7Z5R6 666 aaPredicted RBP10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 UPF3BQ9BZI7 483 aaKnown RBP10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 JAKMIP3Q5VZ66 844 aa10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 SYCP3Q8IZU3 236 aa10.77□□□□□ -0.69
CACNA1D-230ENST00000640483 SLC26A6Q9BXS9 759 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 PDE8AO60658 829 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 TBCAO75347 108 aaKnown RBP10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 HSP90B2PQ58FF3 399 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 DDX21Q9NR30 783 aaKnown RBP eCLIP10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 BABAM1Q9NWV8 329 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 TRAK2O60296 914 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 NBPF7P0C2Y1 421 aaPredicted RBP10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 HIBADHP31937 336 aaKnown RBP10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 FAM196AQ6ZSG2 479 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 LIMCH1Q9UPQ0 1083 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 VPS36Q86VN1 386 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 PAG1Q9NWQ8 432 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 COMMD10Q9Y6G5 202 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 ARHGAP31Q2M1Z3 1444 aa10.76□□□□□ -0.69
CACNA1D-230ENST00000640483 H7C1D1 291 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 GUCY1B3Q02153 619 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 AGLP35573 1532 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 GCC2Q8IWJ2 1684 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 ATP8B2P98198 1209 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 MAGEB6Q8N7X4 407 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 POLR3AO14802 1390 aaPredicted RBP10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 ERVV-2B6SEH9 535 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 CALM1P0DP23 149 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 CALM2P0DP24 149 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 CALM3P0DP25 149 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 MCMDC2Q4G0Z9 681 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 HEATR3Q7Z4Q2 680 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 C8orf58Q8NAV2 365 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 MRPS9P82933 396 aaKnown RBP10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 RGS22Q8NE09 1264 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 RTL9Q8NET4 1388 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 SPDYE3A6NKU9 549 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 LTKP29376 864 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 MRPL50Q8N5N7 158 aaKnown RBP10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 LRRC45Q96CN5 670 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 RRP36Q96EU6 259 aaKnown RBP10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 SCAND2PQ9GZW5 306 aaPredicted RBP10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
CACNA1D-230ENST00000640483 ARHGEF12Q9NZN5 1544 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 KCNA4P22459 653 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 TEX35Q5T0J7 233 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 MSL1Q68DK7 614 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 CERS3Q8IU89 383 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 TEX11Q8IYF3 940 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 CCDC191Q8NCU4 936 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 MEIS3Q99687 375 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 EPB41L2O43491 1005 aaKnown RBP10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 NEFHP12036 1026 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 CWF19L2Q2TBE0 894 aaKnown RBP10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 TAF4BQ92750 862 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 ZBTB43O43298 467 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 ITGA6P23229 1130 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 NAPAP54920 295 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 ARHGEF10LQ9HCE6 1279 aa10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
CACNA1D-230ENST00000640483 PRC1O43663 620 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms