RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 BRD1O95696 1058 aa13.16□□□□□ -0.3
PAX6-257ENST00000639409 IL15P40933 162 aaPredicted RBP13.16□□□□□ -0.3
PAX6-257ENST00000639409 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
PAX6-257ENST00000639409 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
PAX6-257ENST00000639409 SLIT2O94813 1529 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 GOLGA6L3A6NEY3 463 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 GOLGA6L22H0YM25 854 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 KCNJ4P48050 445 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 ZSWIM6Q9HCJ5 1215 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 MYH3P11055 1940 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 A0A0G2JS52 829 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 TRIM28Q13263 835 aaKnown RBP13.15□□□□□ -0.3
PAX6-257ENST00000639409 ACSBG1Q96GR2 724 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 TCEANC2Q96MN5 208 aa13.15□□□□□ -0.3
PAX6-257ENST00000639409 NUTM2BA6NNL0 878 aaPredicted RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 NUTM2EB1AL46 878 aaPredicted RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 TAF5LO75529 589 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
PAX6-257ENST00000639409 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 AXDND1Q5T1B0 1012 aaPredicted RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 NUTM2AQ8IVF1 878 aaPredicted RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 ANP32BQ92688 251 aaKnown RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 LIMCH1Q9UPQ0 1083 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 GOLIM4O00461 696 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 CCDC57Q2TAC2 916 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
PAX6-257ENST00000639409 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
PAX6-257ENST00000639409 CIAO1O76071 339 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
PAX6-257ENST00000639409 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 ZNF830Q96NB3 372 aaPredicted RBP13.13□□□□□ -0.31
PAX6-257ENST00000639409 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 TCHHQ07283 1943 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
PAX6-257ENST00000639409 ADORA1P30542 326 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 DDB1Q16531 1140 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 FOXD4L6Q3SYB3 417 aaPredicted RBP13.13□□□□□ -0.31
PAX6-257ENST00000639409 FOXD4L3Q6VB84 417 aaPredicted RBP13.13□□□□□ -0.31
PAX6-257ENST00000639409 KBTBD3Q8NAB2 608 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 CYP46A1Q9Y6A2 500 aa13.13□□□□□ -0.31
PAX6-257ENST00000639409 PALLDQ8WX93 1383 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 MARCH10Q8NA82 808 aaPredicted RBP13.12□□□□□ -0.31
PAX6-257ENST00000639409 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
PAX6-257ENST00000639409 CSF1RP07333 972 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 ME3Q16798 604 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 L1TD1Q5T7N2 865 aaKnown RBP13.12□□□□□ -0.31
PAX6-257ENST00000639409 CCDC83Q8IWF9 413 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 FAM43AQ8N2R8 423 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 GREM2Q9H772 168 aa13.12□□□□□ -0.31
PAX6-257ENST00000639409 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
PAX6-257ENST00000639409 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
PAX6-257ENST00000639409 TPCN1Q9ULQ1 816 aa13.11□□□□□ -0.31
PAX6-257ENST00000639409 USPL1Q5W0Q7 1092 aa13.11□□□□□ -0.31
PAX6-257ENST00000639409 TTLL11Q8NHH1 800 aa13.11□□□□□ -0.31
PAX6-257ENST00000639409 NWD2Q9ULI1 1742 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 CDHR2Q9BYE9 1310 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 LAMA4Q16363 1823 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 IFIT1P09914 478 aaKnown RBP13.1□□□□□ -0.31
PAX6-257ENST00000639409 IFIT5Q13325 482 aaKnown RBP13.1□□□□□ -0.31
PAX6-257ENST00000639409 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
PAX6-257ENST00000639409 PLCD3Q8N3E9 789 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 NECAB1Q8N987 351 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 CEP126Q9P2H0 1117 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 SPEF2Q9C093 1822 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 SH3TC1Q8TE82 1336 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 ITGA6P23229 1130 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
PAX6-257ENST00000639409 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
PAX6-257ENST00000639409 SCARF1Q14162 830 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 GRPEL1Q9HAV7 217 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 GDPD2Q9HCC8 539 aa13.1□□□□□ -0.31
PAX6-257ENST00000639409 CYP21A2P08686 494 aa13.09□□□□□ -0.31
PAX6-257ENST00000639409 CTSWP56202 376 aa13.09□□□□□ -0.31
PAX6-257ENST00000639409 RNF20Q5VTR2 975 aa13.09□□□□□ -0.31
PAX6-257ENST00000639409 INTS5Q6P9B9 1019 aaKnown RBP13.09□□□□□ -0.31
PAX6-257ENST00000639409 PI16Q6UXB8 463 aa13.09□□□□□ -0.31
PAX6-257ENST00000639409 XAGE2Q96GT9 111 aa13.09□□□□□ -0.31
PAX6-257ENST00000639409 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
PAX6-257ENST00000639409 TRMT112Q9UI30 125 aaKnown RBP13.09□□□□□ -0.31
PAX6-257ENST00000639409 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms