RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 APBB1O00213 710 aa8.36□□□□□ -1.07
NECAP1-213ENST00000638883 ERCC6LQ2NKX8 1250 aa8.36□□□□□ -1.07
NECAP1-213ENST00000638883 BMP2KLQ5H9B9 411 aa8.36□□□□□ -1.07
NECAP1-213ENST00000638883 MCTP2Q6DN12 878 aa8.36□□□□□ -1.07
NECAP1-213ENST00000638883 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
NECAP1-213ENST00000638883 DOT1LQ8TEK3 1739 aa8.36□□□□□ -1.07
NECAP1-213ENST00000638883 COL14A1Q05707 1796 aaKnown RBP8.36□□□□□ -1.07
NECAP1-213ENST00000638883 ARID4AP29374 1257 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 OAS2P29728 719 aaKnown RBP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 TIE1P35590 1138 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 MAGEA9P43362 315 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 HSP90B2PQ58FF3 399 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 MUM1L1Q5H9M0 696 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 RNF217Q8TC41 542 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 LCMT1Q9UIC8 334 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 BRCA1P38398 1863 aaKnown RBP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 IPO8O15397 1037 aaKnown RBP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 RBM6P78332 1123 aaKnown RBP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 USP48Q86UV5 1035 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 MORC1Q86VD1 984 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 TICAM2Q86XR7 235 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 CALR3Q96L12 384 aaKnown RBP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 NEBLO76041 1014 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 MX1P20591 662 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 CASTP20810 708 aaKnown RBP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 SMARCE1Q969G3 411 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 CCDC171Q6TFL3 1326 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 SCN7AQ01118 1682 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 CCDC27Q2M243 656 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 INTS3Q68E01 1043 aaKnown RBP8.35□□□□□ -1.07
NECAP1-213ENST00000638883 FBXO18Q8NFZ0 1043 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 CLIP2Q9UDT6 1046 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 ATP6V1DQ9Y5K8 247 aa8.35□□□□□ -1.07
NECAP1-213ENST00000638883 LRRC37AA6NMS7 1700 aa8.34□□□□□ -1.07
NECAP1-213ENST00000638883 ANKRD65E5RJM6 399 aa8.34□□□□□ -1.07
NECAP1-213ENST00000638883 GADD45BO75293 160 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-213ENST00000638883 PNMA6AP0CW24 399 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-213ENST00000638883 GBP6Q6ZN66 633 aa8.34□□□□□ -1.07
NECAP1-213ENST00000638883 ZCCHC17Q9NP64 241 aaKnown RBP8.34□□□□□ -1.07
NECAP1-213ENST00000638883 PRR36Q9H6K5 1346 aa8.34□□□□□ -1.07
NECAP1-213ENST00000638883 DOCK2Q92608 1830 aa8.34□□□□□ -1.07
NECAP1-213ENST00000638883 BECN2A8MW95 431 aa8.34□□□□□ -1.08
NECAP1-213ENST00000638883 FBLN1P23142 703 aa8.34□□□□□ -1.08
NECAP1-213ENST00000638883 ST5P78524 1137 aa8.34□□□□□ -1.08
NECAP1-213ENST00000638883 EVX2Q03828 476 aa8.34□□□□□ -1.08
NECAP1-213ENST00000638883 IDI1Q13907 227 aa8.34□□□□□ -1.08
NECAP1-213ENST00000638883 MRVI1Q9Y6F6 885 aa8.34□□□□□ -1.08
NECAP1-213ENST00000638883 WDR33Q9C0J8 1336 aaKnown RBP8.33□□□□□ -1.08
NECAP1-213ENST00000638883 RGS12O14924 1447 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 CCDC196A0A1B0GTZ2 297 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 KCNF1Q9H3M0 494 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 PDRG1Q9NUG6 133 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 C2orf72A6NCS6 295 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 MMS22LQ6ZRQ5 1243 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 KIF1BPQ96EK5 621 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 POM121Q96HA1 1249 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 LIG1P18858 919 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 SMC1AQ14683 1233 aaKnown RBP8.33□□□□□ -1.08
NECAP1-213ENST00000638883 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 ANKRD36BQ8N2N9 1353 aa8.33□□□□□ -1.08
NECAP1-213ENST00000638883 AK9Q5TCS8 1911 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 CLSTN1O94985 981 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 SMC2O95347 1197 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 SKILP12757 684 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 ACTN2P35609 894 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 CLCN6P51797 869 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 HDAC1Q13547 482 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-213ENST00000638883 ASTLQ6HA08 431 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-213ENST00000638883 TTC13Q8NBP0 860 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 ACBD3Q9H3P7 528 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 MED4Q9NPJ6 270 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 CDK5RAP2Q96SN8 1893 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 SPEF2Q9C093 1822 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 EIF3CLB5ME19 914 aaKnown RBP8.32□□□□□ -1.08
NECAP1-213ENST00000638883 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-213ENST00000638883 TSR2Q969E8 191 aaKnown RBP8.32□□□□□ -1.08
NECAP1-213ENST00000638883 EIF3CQ99613 913 aaKnown RBP8.32□□□□□ -1.08
NECAP1-213ENST00000638883 SNW1Q13573 536 aaKnown RBP8.32□□□□□ -1.08
NECAP1-213ENST00000638883 RUNDC1Q96C34 613 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 ARFGAP3Q9NP61 516 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 VPS18Q9P253 973 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 ECM29Q5VYK3 1845 aa8.32□□□□□ -1.08
NECAP1-213ENST00000638883 A0A1W2PP64 1363 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 PPP1R12AO14974 1030 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-213ENST00000638883 URI1O94763 535 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-213ENST00000638883 NF2P35240 595 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 CAMK4Q16566 473 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 PACS2Q86VP3 889 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 LTKP29376 864 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 NUCB1Q02818 461 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 ZSCAN25Q6NSZ9 544 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 KIF2CQ99661 725 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 ZNF446Q9NWS9 450 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 RAI14Q9P0K7 980 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 MCM2P49736 904 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 HSPA2P54652 639 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 SLFNL1Q499Z3 407 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 FAM200AQ8TCP9 573 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms