RNA–Protein interactions for RNA: ENST00000638873.1

SPIN3-215, Transcript of spindlin family member 3, humanhuman

TSL 2

Gene SPIN3, Length 3,221 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-215ENST00000638873 DDX11Q96FC9 970 aa14.39□□□□□ -0.11
SPIN3-215ENST00000638873 ZNF142P52746 1687 aaPredicted RBP14.39□□□□□ -0.11
SPIN3-215ENST00000638873 HSP90B1P14625 803 aaKnown RBP14.39□□□□□ -0.11
SPIN3-215ENST00000638873 KCNH5Q8NCM2 988 aa14.39□□□□□ -0.11
SPIN3-215ENST00000638873 ANO10Q9NW15 660 aa14.39□□□□□ -0.11
SPIN3-215ENST00000638873 TAF6LQ9Y6J9 622 aa14.39□□□□□ -0.11
SPIN3-215ENST00000638873 EIF4A1P60842 406 aaKnown RBP14.39□□□□□ -0.11
SPIN3-215ENST00000638873 FAM193AP78312 1265 aa14.39□□□□□ -0.11
SPIN3-215ENST00000638873 KRT32Q14532 448 aa14.39□□□□□ -0.11
SPIN3-215ENST00000638873 CCDC8Q9H0W5 538 aaPredicted RBP14.39□□□□□ -0.11
SPIN3-215ENST00000638873 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
SPIN3-215ENST00000638873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
SPIN3-215ENST00000638873 KINO60870 393 aaKnown RBP14.38□□□□□ -0.11
SPIN3-215ENST00000638873 ANXA1P04083 346 aa14.38□□□□□ -0.11
SPIN3-215ENST00000638873 G3BP1Q13283 466 aaKnown RBP eCLIP14.38□□□□□ -0.11
SPIN3-215ENST00000638873 BOLA2Q9H3K6 86 aa14.38□□□□□ -0.11
SPIN3-215ENST00000638873 TSGA10IPQ3SY00 556 aa14.38□□□□□ -0.11
SPIN3-215ENST00000638873 CEP57L1Q8IYX8 460 aa14.38□□□□□ -0.11
SPIN3-215ENST00000638873 TIGD1Q96MW7 591 aa14.38□□□□□ -0.11
SPIN3-215ENST00000638873 KCND1Q9NSA2 647 aa14.38□□□□□ -0.11
SPIN3-215ENST00000638873 BMS1Q14692 1282 aaKnown RBP14.37□□□□□ -0.11
SPIN3-215ENST00000638873 CREBRFQ8IUR6 639 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 ADCY9O60503 1353 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 NPHP1O15259 732 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 ALDH1L1O75891 902 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 SNW1Q13573 536 aaKnown RBP14.37□□□□□ -0.11
SPIN3-215ENST00000638873 ZNF530Q6P9A1 599 aaPredicted RBP14.37□□□□□ -0.11
SPIN3-215ENST00000638873 DHX40Q8IX18 779 aaKnown RBP14.37□□□□□ -0.11
SPIN3-215ENST00000638873 EAF2Q96CJ1 260 aaPredicted RBP14.37□□□□□ -0.11
SPIN3-215ENST00000638873 NAT10Q9H0A0 1025 aaKnown RBP14.37□□□□□ -0.11
SPIN3-215ENST00000638873 TMEM51Q9NW97 253 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 MED23Q9ULK4 1368 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 ERICH4A6NGS2 130 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 GTF2E1P29083 439 aaPredicted RBP14.37□□□□□ -0.11
SPIN3-215ENST00000638873 ARHGEF25Q86VW2 580 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 CALCOCO1Q9P1Z2 691 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 LMTK3Q96Q04 1460 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 PIK3C2AO00443 1686 aa14.37□□□□□ -0.11
SPIN3-215ENST00000638873 CDK11BP21127 795 aaKnown RBP14.36□□□□□ -0.11
SPIN3-215ENST00000638873 NEK1Q96PY6 1258 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 A0A0G2JS52 829 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 ZNF589Q86UQ0 364 aaPredicted RBP14.36□□□□□ -0.11
SPIN3-215ENST00000638873 AOPEPQ8N6M6 819 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 PRDM11Q9NQV5 511 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 RCOR1Q9UKL0 485 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 MAP3K2Q9Y2U5 619 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 SASH1O94885 1247 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 Q6ZUG5 572 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
SPIN3-215ENST00000638873 GOLPH3LQ9H4A5 285 aa14.36□□□□□ -0.11
SPIN3-215ENST00000638873 ERBB3P21860 1342 aa14.35□□□□□ -0.11
SPIN3-215ENST00000638873 IMPACTQ9P2X3 320 aa14.35□□□□□ -0.11
SPIN3-215ENST00000638873 TAF5LO75529 589 aa14.35□□□□□ -0.11
SPIN3-215ENST00000638873 FAM160A1Q05DH4 1040 aa14.35□□□□□ -0.11
SPIN3-215ENST00000638873 OSBPL5Q9H0X9 879 aaPredicted RBP14.35□□□□□ -0.11
SPIN3-215ENST00000638873 ST7Q9NRC1 585 aa14.35□□□□□ -0.11
SPIN3-215ENST00000638873 ZNF446Q9NWS9 450 aa14.35□□□□□ -0.11
SPIN3-215ENST00000638873 TLR7Q9NYK1 1049 aaKnown RBP14.35□□□□□ -0.11
SPIN3-215ENST00000638873 NRDCO43847 1150 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 ZNF396Q96N95 335 aaPredicted RBP14.34□□□□□ -0.11
SPIN3-215ENST00000638873 DBF4Q9UBU7 674 aaPredicted RBP14.34□□□□□ -0.11
SPIN3-215ENST00000638873 A0A087WWV3 80 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 H2AFXP16104 143 aaPredicted RBP14.34□□□□□ -0.11
SPIN3-215ENST00000638873 FOSBP53539 338 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 ERCC6LQ2NKX8 1250 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 CCDC150Q8NCX0 1101 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 L2HGDHQ9H9P8 463 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 ZBTB22O15209 634 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 KCNQ3O43525 872 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 ADD1P35611 737 aaKnown RBP14.34□□□□□ -0.11
SPIN3-215ENST00000638873 NAA16Q6N069 864 aaPredicted RBP14.34□□□□□ -0.11
SPIN3-215ENST00000638873 FSIP1Q8NA03 581 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 FBXW7Q969H0 707 aa14.34□□□□□ -0.11
SPIN3-215ENST00000638873 LLPHQ9BRT6 129 aaKnown RBP14.34□□□□□ -0.11
SPIN3-215ENST00000638873 JCADQ9P266 1359 aa14.33□□□□□ -0.11
SPIN3-215ENST00000638873 MST1RQ04912 1400 aa14.33□□□□□ -0.11
SPIN3-215ENST00000638873 ZRSR1Q15695 479 aaKnown RBP14.33□□□□□ -0.12
SPIN3-215ENST00000638873 CWF19L2Q2TBE0 894 aaKnown RBP14.33□□□□□ -0.12
SPIN3-215ENST00000638873 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.12
SPIN3-215ENST00000638873 SYT10Q6XYQ8 523 aa14.33□□□□□ -0.12
SPIN3-215ENST00000638873 FTOQ9C0B1 505 aaKnown RBP eCLIP14.33□□□□□ -0.12
SPIN3-215ENST00000638873 ME1P48163 572 aa14.33□□□□□ -0.12
SPIN3-215ENST00000638873 KSR2Q6VAB6 950 aa14.33□□□□□ -0.12
SPIN3-215ENST00000638873 PPP1R13BQ96KQ4 1090 aa14.33□□□□□ -0.12
SPIN3-215ENST00000638873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.12
SPIN3-215ENST00000638873 NWD1Q149M9 1564 aa14.33□□□□□ -0.12
SPIN3-215ENST00000638873 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
SPIN3-215ENST00000638873 TEFQ10587 303 aa14.32□□□□□ -0.12
SPIN3-215ENST00000638873 SCRN1Q12765 414 aa14.32□□□□□ -0.12
SPIN3-215ENST00000638873 E4F1Q66K89 784 aaPredicted RBP14.32□□□□□ -0.12
SPIN3-215ENST00000638873 ATL3Q6DD88 541 aa14.32□□□□□ -0.12
SPIN3-215ENST00000638873 ENGASEQ8NFI3 743 aa14.32□□□□□ -0.12
SPIN3-215ENST00000638873 SMARCC2Q8TAQ2 1214 aa14.32□□□□□ -0.12
SPIN3-215ENST00000638873 USP28Q96RU2 1077 aa14.32□□□□□ -0.12
SPIN3-215ENST00000638873 PSDA5PKW4 1024 aaPredicted RBP14.32□□□□□ -0.12
SPIN3-215ENST00000638873 SMC2O95347 1197 aa14.32□□□□□ -0.12
SPIN3-215ENST00000638873 TUBB4AP04350 444 aa14.32□□□□□ -0.12
SPIN3-215ENST00000638873 SFPQP23246 707 aaKnown RBP eCLIP14.32□□□□□ -0.12
SPIN3-215ENST00000638873 NBPF11Q86T75 865 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms