RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 IGHMBP2P38935 993 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 SUSD4Q5VX71 490 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 SH3TC1Q8TE82 1336 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 STX6O43752 255 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 SCARF1Q14162 830 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 NECTIN1Q15223 517 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 LRRFIP1Q32MZ4 808 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 Q6ZUG5 572 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 USP21Q9UK80 565 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 ZDHHC9Q9Y397 364 aa11.51□□□□□ -0.57
CACNA1A-248ENST00000637774 PDE8AO60658 829 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 XRCC6P12956 609 aaKnown RBP eCLIP11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 SYT1P21579 422 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 AEBP2Q6ZN18 517 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 RALYLQ86SE5 291 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 TPCN1Q9ULQ1 816 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 LMO7Q8WWI1 1683 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 SYCE3A1L190 88 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 DDIT3P35638 169 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 IL6STP40189 918 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 GUCY1B3Q02153 619 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 ITPK1Q13572 414 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 RRP12Q5JTH9 1297 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 GRPEL1Q9HAV7 217 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 VIRMAQ69YN4 1812 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 AK9Q5TCS8 1911 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 CACNA1FO60840 1977 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 RNF113AO15541 343 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 PTF1AQ7RTS3 328 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 CNPY2Q9Y2B0 182 aa11.5□□□□□ -0.57
CACNA1A-248ENST00000637774 USP42Q9H9J4 1324 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 CDCA7Q9BWT1 371 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 TFIP11Q9UBB9 837 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 JAG2Q9Y219 1238 aa11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 A0A0G2JLW4 131 aa11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 GNPATO15228 680 aa11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 CYP21A2P08686 494 aa11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 PHKA1P46020 1223 aa11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 ZSCAN31Q96LW9 406 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-248ENST00000637774 ZPR1O75312 459 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 ZSWIM6Q9HCJ5 1215 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 ZNF652Q9Y2D9 606 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 APOBRQ0VD83 1088 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 TRDNQ13061 729 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 KRT32Q14532 448 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 GAS2L3Q86XJ1 694 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 INTS4Q96HW7 963 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 LMBRD1Q9NUN5 540 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 PALLDQ8WX93 1383 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 RPS6KB1P23443 525 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 MRE11P49959 708 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 ANKRD1Q15327 319 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 OSBP2Q969R2 916 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 ATP6V1DQ9Y5K8 247 aa11.48□□□□□ -0.57
CACNA1A-248ENST00000637774 KDM3BQ7LBC6 1761 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 DNM1Q05193 864 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 CUL4AQ13619 759 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 KLHL40Q2TBA0 621 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 CCDC152Q4G0S7 254 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 USP48Q86UV5 1035 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 CHMP4CQ96CF2 233 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 SH2B1Q9NRF2 756 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 CPLX1O14810 134 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 JAK2O60674 1132 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 GADD45BO75293 160 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 BRD1O95696 1058 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 HSPD1P10809 573 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 MPNDQ8N594 471 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 SMARCC1Q92922 1105 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 NCOA5Q9HCD5 579 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 SRP68Q9UHB9 627 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 NSFL1CQ9UNZ2 370 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 UBN2Q6ZU65 1347 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 PHRF1Q9P1Y6 1649 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 ZSCAN22P10073 491 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 SLC5A1P13866 664 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 IMMTQ16891 758 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 TTC14Q96N46 770 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 RAI14Q9P0K7 980 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 HMG20BQ9P0W2 317 aa11.47□□□□□ -0.57
CACNA1A-248ENST00000637774 M0R2C6 588 aa11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 NASPP49321 788 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 BCAMP50895 628 aa11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 CHAF1AQ13111 956 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 CCDC144CPQ8IYA2 1237 aa11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 MIGA1Q8NAN2 632 aa11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-248ENST00000637774 MAST3O60307 1309 aa11.46□□□□□ -0.58
CACNA1A-248ENST00000637774 ZNF213O14771 459 aa11.46□□□□□ -0.58
CACNA1A-248ENST00000637774 PDE8BO95263 885 aa11.46□□□□□ -0.58
CACNA1A-248ENST00000637774 TRIM28Q13263 835 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms